[med-svn] [Git][med-team/mothur][upstream] 4 commits: New upstream version 1.48.2

[Tomasz Buchert (@tomasz)]

Tomasz Buchert pushed to branch upstream at Debian Med / mothur


Commits:
73ec5ffb by Tomasz Buchert at 2026-02-07T19:58:24+01:00
New upstream version 1.48.2
- - - - -
b8b153f2 by Tomasz Buchert at 2026-02-07T20:00:05+01:00
New upstream version 1.48.3
- - - - -
630b4617 by Tomasz Buchert at 2026-02-07T20:01:43+01:00
New upstream version 1.48.4
- - - - -
2f5d23c0 by Tomasz Buchert at 2026-02-07T20:03:28+01:00
New upstream version 1.48.5
- - - - -


50 changed files:

- .gitignore
- External_Libraries_INSTALL
- Makefile
- Mothur.xcodeproj/project.pbxproj
- TestMothur/dataset.cpp
- TestMothur/testcontainers/testsharedrabundfloatvector.hpp
- TestMothur/testsubsample.hpp
- TestMothur/testtrimoligos.hpp
- Ubuntu_20_Build.txt
- source/calculators/structeuclidean.cpp
- source/calculators/structeuclidean.h
- source/classifier/classify.cpp
- source/commands/aligncommand.cpp
- source/commands/chimerauchimecommand.cpp
- source/commands/chimeravsearchcommand.cpp
- source/commands/clearcutcommand.cpp
- source/commands/clustercommand.cpp
- source/commands/countseqscommand.cpp
- source/commands/distsharedcommand.cpp
- source/commands/distsharedcommand.h
- source/commands/getseqscommand.cpp
- source/commands/lefsecommand.cpp
- source/commands/makeclrcommand.cpp
- source/commands/makecontigscommand.cpp
- source/commands/pcrseqscommand.cpp
- source/commands/preclustercommand.cpp
- source/commands/rarefactsharedcommand.cpp
- source/commands/removegroupscommand.cpp
- source/commands/screenseqscommand.cpp
- source/commands/seqerrorcommand.cpp
- source/datastructures/counttable.cpp
- source/datastructures/optidata.cpp
- source/datastructures/optidata.hpp
- − source/datastructures/optidb.cpp
- − source/datastructures/optidb.hpp
- source/datastructures/optimatrix.cpp
- source/datastructures/qualityscores.cpp
- source/datastructures/sequence.cpp
- source/engines/engine.hpp
- source/fileoutput.cpp
- source/linearalgebra.cpp
- source/mothur.h
- source/raredisplay.cpp
- source/raredisplay.h
- source/rarefactioncurvedata.h
- source/summary.cpp
- source/uchime_src/makefile
- source/utils.cpp
- source/validcalculator.cpp
- source/validcalculator.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/mothur/-/compare/610156ad98ab8077ae0201c36f35c5c6eefb02a6...2f5d23c02fc2b5787870e5192e741fb31dfb6418

-- 
View it on GitLab: https://salsa.debian.org/med-team/mothur/-/compare/610156ad98ab8077ae0201c36f35c5c6eefb02a6...2f5d23c02fc2b5787870e5192e741fb31dfb6418
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260207/49323b14/attachment-0001.htm>