[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille (@tille) gitlab at salsa.debian.org
Sun Feb 8 01:42:29 GMT 2026



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
2c018b43 by Andreas Tille at 2026-02-08T01:42:23+00:00
automatic update

- - - - -


4 changed files:

- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,16 +1,16 @@
-Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
+Last-Update: Sun, 08 Feb 2026 01:42:03 +0000
 
  Source                        | Vote   | Tasks                                      |                                 Tags                                 
 -------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
  dicomscope                    |     26 | {imaging}                                  | 
- gnumed-server                 |     16 | {covid-19,practice}                        | 
+ gnumed-server                 |     16 | {practice,covid-19}                        | 
  mrtrix3                       |     16 | {imaging}                                  | 
  orthanc-gdcm                  |     16 | {imaging}                                  | 
  pixelmed                      |     15 | {imaging}                                  | 
  sight                         |     14 | {imaging}                                  | 
  orthanc-mysql                 |     12 | {imaging}                                  | 
  orthanc-postgresql            |     12 | {imaging}                                  | 
- oscar                         |     12 | {data,practice,tools}                      | 
+ oscar                         |     12 | {tools,data,practice}                      | 
  biojava-live                  |     11 | {bio-dev}                                  | 
  icb-utils                     |     10 | {bio-dev}                                  | 
  jebl2                         |     10 | {bio-dev}                                  | 
@@ -21,15 +21,15 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  ants                          |      7 | {imaging}                                  | 
  sight                         |      7 | {imaging}                                  | 
  bart-view                     |      6 | {imaging}                                  | 
- bio-tradis                    |      6 | {bio-dev,bio}                              | 
+ bio-tradis                    |      6 | {bio,bio-dev}                              | 
  embassy-domainatrix           |      6 | {bio,cloud}                                | 
  ipig                          |      6 | {bio}                                      | 
- melting                       |      6 | {bio,cloud}                                | 
+ melting                       |      6 | {cloud,bio}                                | 
  piler                         |      6 | {bio}                                      | 
  dextractor                    |      5 | {covid-19,bio}                             | 
  fastml                        |      5 | {bio}                                      | 
  phyutility                    |      5 | {cloud,bio}                                | 
- proalign                      |      5 | {bio,bio-phylogeny}                        | 
+ proalign                      |      5 | {bio-phylogeny,bio}                        | 
  saint                         |      5 | {bio}                                      | 
  spread-phy                    |      5 | {bio,bio-phylogeny}                        | 
  treeview                      |      5 | {bio-phylogeny,bio}                        | 
@@ -38,17 +38,17 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  embassy-domsearch             |      4 | {bio,cloud}                                | 
  kmerresistance                |      4 | {bio}                                      | 
  mhap                          |      4 | {bio,bio-ngs}                              | 
- plasmidid                     |      4 | {covid-19,bio}                             | 
+ plasmidid                     |      4 | {bio,covid-19}                             | 
  rambo-k                       |      4 | {bio}                                      | 
  rtax                          |      4 | {bio,cloud}                                | 
  runcircos-gui                 |      4 | {bio}                                      | 
  sga                           |      4 | {bio}                                      | 
  sibsim4                       |      4 | {bio,cloud}                                | 
  surankco                      |      4 | {bio}                                      | 
- tophat-recondition            |      4 | {bio,covid-19}                             | 
- beast-mcmc                    |      3 | {bio,bio-phylogeny}                        | 
+ tophat-recondition            |      4 | {covid-19,bio}                             | 
+ beast-mcmc                    |      3 | {bio-phylogeny,bio}                        | 
  ctffind                       |      3 | {bio}                                      | 
- htscodecs                     |      3 | {covid-19,bio-dev}                         | 
+ htscodecs                     |      3 | {bio-dev,covid-19}                         | 
  insighttoolkit5               |      3 | {imaging-dev}                              | 
  lamarc                        |      3 | {bio}                                      | 
  libjloda-java                 |      3 | {bio-dev}                                  | 
@@ -69,13 +69,13 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  sprai                         |      3 | {bio}                                      | 
  suitename                     |      3 | {bio}                                      | 
  surpyvor                      |      3 | {bio}                                      | 
- thesias                       |      3 | {bio,covid-19}                             | 
+ thesias                       |      3 | {covid-19,bio}                             | 
  tracetuner                    |      3 | {bio}                                      | 
  getdata                       |      2 | {bio}                                      | 
  libbpp-core                   |      2 | {bio-dev}                                  | 
  libgenome                     |      2 | {bio-dev}                                  | 
  pigx-rnaseq                   |      2 | {bio,covid-19}                             | 
- acedb                         |      1 | {cloud,bio}                                | 
+ acedb                         |      1 | {bio,cloud}                                | 
  bambamc                       |      1 | {bio-dev}                                  | 
  cmtk                          |      1 | {imaging}                                  | 
  jmodeltest                    |      1 | {bio,bio-phylogeny}                        | 
@@ -120,7 +120,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  libbiosoup-dev                |      0 | {bio-dev}                                  | 
  libchado-perl                 |      0 | {bio-dev}                                  | 
  libctapimkt                   |      0 | {practice}                                 | 
- libics                        |      0 | {covid-19,imaging-dev}                     | 
+ libics                        |      0 | {imaging-dev,covid-19}                     | 
  libmialm                      |      0 | {imaging-dev}                              | 
  libpsortb                     |      0 | {bio-dev}                                  | 
  libvistaio                    |      0 | {imaging-dev}                              | 
@@ -133,7 +133,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  papyrus                       |      0 | {imaging-dev}                              | 
  pbseqlib                      |      0 | {bio-dev}                                  | 
  python-seqcluster             |      0 | {bio}                                      | 
- python-seqcluster             |      0 | {covid-19,bio-dev}                         | 
+ python-seqcluster             |      0 | {bio-dev,covid-19}                         | 
  resfinder-db                  |      0 | {bio}                                      | 
  savvy                         |      0 | {bio-dev}                                  | 
  sbmltoolbox                   |      0 | {bio-dev}                                  | 
@@ -146,6 +146,6 @@ Last-Update: Sat, 07 Feb 2026 13:42:04 +0000
  xdffileio                     |      0 | {imaging-dev}                              | 
  xxsds-dynamic                 |      0 | {bio-dev}                                  | 
  sideretro                     |     -1 | {bio}                                      | 
- tipp                          |     -1 | {bio,covid-19}                             | 
+ tipp                          |     -1 | {covid-19,bio}                             | 
 (169 rows)
 


=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
+Last-Update: Sun, 08 Feb 2026 01:42:04 +0000
 
        Source                              | Vote   |             Tasks                                                   |                        Tags                         
 -------------------------------------------+--------+---------------------------------------------------------------------+-----------------------------------------------------
@@ -13,7 +13,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  mbpoll                                    |     67 | {simulations}                                                       | 
  imview                                    |     60 | {viewing}                                                           | 
  refmac-dictionary                         |     59 | {highenergy-physics-dev,chemistry}                                  | 
- guiqwt                                    |     51 | {numericalcomputation,viewing}                                      | 
+ guiqwt                                    |     51 | {viewing,numericalcomputation}                                      | 
  scalapack                                 |     50 | {nanoscale-physics-dev}                                             | 
  muparser                                  |     48 | {mathematics-dev}                                                   | 
  pyzo                                      |     48 | {numericalcomputation}                                              | 
@@ -21,43 +21,43 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  teem                                      |     43 | {imageanalysis}                                                     | 
  sardana                                   |     38 | {dataacquisition}                                                   | 
  setzer                                    |     38 | {typesetting}                                                       | 
- lxi-tools                                 |     37 | {dataacquisition,engineering}                                       | 
+ lxi-tools                                 |     37 | {engineering,dataacquisition}                                       | 
  apophenia                                 |     32 | {statistics}                                                        | 
  sketch                                    |     32 | {typesetting}                                                       | 
- python-escript                            |     31 | {simulations,numericalcomputation,engineering}                      | 
- coinor-symphony                           |     30 | {logic,mathematics,numericalcomputation}                            | 
- persalys                                  |     30 | {statistics,mathematics,engineering}                                | 
- debian-science                            |     29 | {physics,machine-learning,economics,mathematics,nanoscale-physics}  | 
+ python-escript                            |     31 | {numericalcomputation,simulations,engineering}                      | 
+ coinor-symphony                           |     30 | {numericalcomputation,logic,mathematics}                            | 
+ persalys                                  |     30 | {engineering,statistics,mathematics}                                | 
+ debian-science                            |     29 | {mathematics,physics,machine-learning,nanoscale-physics,economics}  | 
  geg                                       |     29 | {viewing}                                                           | 
  ppl                                       |     28 | {numericalcomputation}                                              | 
  dune-uggrid                               |     27 | {mathematics-dev}                                                   | 
- flann                                     |     27 | {mathematics-dev,engineering-dev}                                   | 
- getdp                                     |     27 | {mathematics,simulations,engineering}                               | 
+ flann                                     |     27 | {engineering-dev,mathematics-dev}                                   | 
+ getdp                                     |     27 | {simulations,mathematics,engineering}                               | 
  eccodes                                   |     26 | {meteorology,meteorology-dev}                                       | 
  feedgnuplot                               |     26 | {viewing}                                                           | 
- persalys                                  |     26 | {mathematics,engineering,statistics}                                | 
+ persalys                                  |     26 | {statistics,mathematics,engineering}                                | 
  psurface                                  |     26 | {numericalcomputation}                                              | 
  sdpb                                      |     26 | {numericalcomputation,highenergy-physics}                           | 
  debian-science                            |     25 | {tools}                                                             | 
- debian-science                            |     25 | {machine-learning,nanoscale-physics,economics,physics}              | 
+ debian-science                            |     25 | {machine-learning,economics,physics,nanoscale-physics}              | 
  libmatio                                  |     25 | {mathematics-dev}                                                   | 
- toulbar2                                  |     25 | {mathematics,numericalcomputation,physics,logic}                    | 
- fftw                                      |     24 | {mathematics-dev,meteorology-dev,physics-dev}                       | 
+ toulbar2                                  |     25 | {logic,physics,mathematics,numericalcomputation}                    | 
+ fftw                                      |     24 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
  libcvd                                    |     24 | {imageanalysis}                                                     | 
  ipe-tools                                 |     23 | {typesetting}                                                       | 
  sat4j                                     |     23 | {logic}                                                             | 
  arduino-mk                                |     22 | {robotics}                                                          | 
  debian-science                            |     22 | {electrophysiology}                                                 | 
- debian-science                            |     22 | {machine-learning,neuroscience-cognitive}                           | 
+ debian-science                            |     22 | {neuroscience-cognitive,machine-learning}                           | 
  libm4ri                                   |     22 | {mathematics-dev}                                                   | 
  grads                                     |     21 | {meteorology}                                                       | 
  flintqs                                   |     20 | {mathematics}                                                       | 
- jeuclid                                   |     20 | {viewing,typesetting}                                               | 
+ jeuclid                                   |     20 | {typesetting,viewing}                                               | 
  mseed2sac                                 |     20 | {dataacquisition-dev}                                               | 
  gts                                       |     19 | {viewing-dev}                                                       | 
  picosat                                   |     19 | {logic}                                                             | 
  xygrib                                    |     19 | {meteorology}                                                       | 
- libvigraimpex                             |     18 | {imageanalysis-dev,machine-learning}                                | 
+ libvigraimpex                             |     18 | {machine-learning,imageanalysis-dev}                                | 
  eccodes                                   |     17 | {meteorology-dev}                                                   | 
  opencascade                               |     17 | {simulations}                                                       | 
  rubiks                                    |     16 | {mathematics,geometry}                                              | 
@@ -74,13 +74,13 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  ncl                                       |     12 | {meteorology}                                                       | 
  toon                                      |     12 | {numericalcomputation}                                              | 
  bossa                                     |     11 | {devices}                                                           | 
- libitpp                                   |     11 | {engineering-dev,mathematics-dev}                                   | 
- liblxi                                    |     11 | {dataacquisition-dev,engineering-dev}                               | 
- matlab-support                            |     11 | {mathematics,numericalcomputation}                                  | 
+ libitpp                                   |     11 | {mathematics-dev,engineering-dev}                                   | 
+ liblxi                                    |     11 | {engineering-dev,dataacquisition-dev}                               | 
+ matlab-support                            |     11 | {numericalcomputation,mathematics}                                  | 
  ros-vcstool                               |     11 | {robotics-dev}                                                      | 
  vdt                                       |     11 | {mathematics-dev}                                                   | 
  cliquer                                   |     10 | {mathematics}                                                       | 
- fftw                                      |     10 | {meteorology-dev,physics-dev,mathematics-dev}                       | 
+ fftw                                      |     10 | {meteorology-dev,mathematics-dev,physics-dev}                       | 
  gf2x                                      |     10 | {mathematics-dev}                                                   | 
  hdf-eos4                                  |     10 | {meteorology-dev}                                                   | 
  libgctp                                   |     10 | {meteorology-dev}                                                   | 
@@ -91,7 +91,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  uctodata                                  |     10 | {linguistics}                                                       | 
  vlfeat                                    |     10 | {imageanalysis-dev}                                                 | 
  chemical-structures                       |      9 | {chemistry}                                                         | 
- debian-science                            |      9 | {statistics,economics,nanoscale-physics,physics}                    | 
+ debian-science                            |      9 | {economics,physics,statistics,nanoscale-physics}                    | 
  form                                      |      9 | {mathematics}                                                       | 
  libm4rie                                  |      9 | {mathematics-dev}                                                   | 
  libxsmm                                   |      9 | {mathematics-dev}                                                   | 
@@ -102,14 +102,14 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  qwtplot3d                                 |      9 | {viewing-dev}                                                       | 
  sagemath-database-conway-polynomials      |      9 | {mathematics}                                                       | 
  boolector                                 |      8 | {logic}                                                             | 
- hpcc                                      |      8 | {distributedcomputing,numericalcomputation}                         | 
+ hpcc                                      |      8 | {numericalcomputation,distributedcomputing}                         | 
  libmatheval                               |      8 | {mathematics}                                                       | 
  libzn-poly                                |      8 | {mathematics-dev}                                                   | 
  odc                                       |      8 | {meteorology}                                                       | 
  coinor-bonmin                             |      7 | {mathematics}                                                       | 
  etsf-io                                   |      7 | {nanoscale-physics,physics}                                         | 
  libccp4                                   |      7 | {nanoscale-physics-dev}                                             | 
- libgtkdatabox                             |      7 | {engineering-dev,viewing-dev}                                       | 
+ libgtkdatabox                             |      7 | {viewing-dev,engineering-dev}                                       | 
  libmatheval                               |      7 | {mathematics-dev}                                                   | 
  liborigin2                                |      7 | {viewing-dev}                                                       | 
  magics++                                  |      7 | {meteorology-dev}                                                   | 
@@ -118,12 +118,12 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  veccore                                   |      7 | {mathematics-dev}                                                   | 
  coda                                      |      6 | {meteorology-dev}                                                   | 
  coda                                      |      6 | {meteorology}                                                       | 
- coinmp                                    |      6 | {numericalcomputation,mathematics-dev,logic}                        | 
+ coinmp                                    |      6 | {numericalcomputation,logic,mathematics-dev}                        | 
  dimbl                                     |      6 | {linguistics}                                                       | 
  metview                                   |      6 | {meteorology}                                                       | 
  newmat                                    |      6 | {mathematics-dev}                                                   | 
  silo-llnl                                 |      6 | {engineering}                                                       | 
- spfft                                     |      6 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} | 
+ spfft                                     |      6 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} | 
  ucto                                      |      6 | {linguistics}                                                       | 
  urdfdom-headers                           |      6 | {robotics-dev}                                                      | 
  ckon                                      |      5 | {highenergy-physics-dev}                                            | 
@@ -169,11 +169,11 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  spaghetti                                 |      3 | {geography}                                                         | 
  ssm                                       |      3 | {nanoscale-physics-dev}                                             | 
  timblserver                               |      3 | {linguistics}                                                       | 
- trilinos                                  |      3 | {mathematics-dev,physics-dev,engineering-dev}                       | 
+ trilinos                                  |      3 | {physics-dev,engineering-dev,mathematics-dev}                       | 
  apache-opennlp                            |      2 | {linguistics}                                                       | 
  apertium-streamparser                     |      2 | {linguistics}                                                       | 
  apriltag                                  |      2 | {robotics-dev}                                                      | 
- code-saturne                              |      2 | {engineering-dev,mathematics-dev}                                   | 
+ code-saturne                              |      2 | {mathematics-dev,engineering-dev}                                   | 
  dune-functions                            |      2 | {mathematics-dev}                                                   | 
  dune-localfunctions                       |      2 | {mathematics-dev}                                                   | 
  dune-typetree                             |      2 | {mathematics-dev}                                                   | 
@@ -215,7 +215,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  apertium-urd                              |      0 | {linguistics}                                                       | 
  apertium-urd-hin                          |      0 | {linguistics}                                                       | 
  asl                                       |      0 | {physics-dev}                                                       | 
- calculix-ccx-test                         |      0 | {numericalcomputation,engineering,simulations}                      | 
+ calculix-ccx-test                         |      0 | {numericalcomputation,simulations,engineering}                      | 
  clhep                                     |      0 | {highenergy-physics-dev}                                            | 
  coda                                      |      0 | {meteorology-dev}                                                   | 
  code-saturne                              |      0 | {engineering}                                                       | 
@@ -227,20 +227,20 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  etsf-io                                   |      0 | {nanoscale-physics-dev}                                             | 
  fastjet                                   |      0 | {highenergy-physics-dev}                                            | 
  glpk-java                                 |      0 | {mathematics-dev}                                                   | 
- hepmc3                                    |      0 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
+ hepmc3                                    |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  libfolia                                  |      0 | {linguistics}                                                       | 
  libquantum                                |      0 | {numericalcomputation}                                              | 
  libsdsl                                   |      0 | {dataacquisition-dev}                                               | 
  looptools                                 |      0 | {highenergy-physics-dev}                                            | 
  mbt                                       |      0 | {linguistics}                                                       | 
- mctc-lib                                  |      0 | {highenergy-physics-dev,nanoscale-physics-dev}                      | 
+ mctc-lib                                  |      0 | {nanoscale-physics-dev,highenergy-physics-dev}                      | 
  metis-edf                                 |      0 | {engineering-dev}                                                   | 
  metis-edf                                 |      0 | {engineering,numericalcomputation}                                  | 
  openctm                                   |      0 | {physics-dev}                                                       | 
  opengv                                    |      0 | {geometry}                                                          | 
  openigtlink                               |      0 | {robotics-dev}                                                      | 
  psurface                                  |      0 | {numericalcomputation}                                              | 
- python-escript                            |      0 | {numericalcomputation,engineering,simulations}                      | 
+ python-escript                            |      0 | {simulations,engineering,numericalcomputation}                      | 
  python-opcodes                            |      0 | {tools}                                                             | 
  qrupdate                                  |      0 | {mathematics-dev}                                                   | 
  robot-testing-framework                   |      0 | {robotics-dev}                                                      | 
@@ -251,7 +251,7 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  sagemath-database-elliptic-curves         |      0 | {mathematics}                                                       | 
  sagemath-database-graphs                  |      0 | {mathematics}                                                       | 
  sagemath-database-polytopes               |      0 | {mathematics}                                                       | 
- schroedinger-maeparser                    |      0 | {chemistry,nanoscale-physics-dev}                                   | 
+ schroedinger-maeparser                    |      0 | {nanoscale-physics-dev,chemistry}                                   | 
  siscone                                   |      0 | {highenergy-physics-dev}                                            | 
  slicot                                    |      0 | {engineering-dev,robotics-dev}                                      | 
  ssm                                       |      0 | {nanoscale-physics}                                                 | 
@@ -266,6 +266,6 @@ Last-Update: Sat, 07 Feb 2026 13:42:06 +0000
  virtuoso-opensource                       |      0 | {datamanagement}                                                    | 
  visp-images                               |      0 | {robotics-dev}                                                      | 
  libelas                                   |     -1 | {robotics-dev}                                                      | 
- sisl                                      |     -1 | {engineering-dev,robotics-dev}                                      | 
+ sisl                                      |     -1 | {robotics-dev,engineering-dev}                                      | 
 (295 rows)
 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.

=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 07 Feb 2026 13:42:07 +0000
+Last-Update: Sun, 08 Feb 2026 01:42:04 +0000
 
      Source                             | Vote   |                          Tags                          
 ----------------------------------------+--------+--------------------------------------------------------



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/2c018b433989c6de9fb542f9844719f6c3b509a1

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