[med-svn] [Git][med-team/mira][master] 4 commits: Really fix clean target Closes: #1045311
Andreas Tille (@tille)
gitlab at salsa.debian.org
Sun Feb 15 14:27:49 GMT 2026
Andreas Tille pushed to branch master at Debian Med / mira
Commits:
4d47ed90 by Andreas Tille at 2026-02-15T13:56:52+01:00
Really fix clean target Closes: #1045311
- - - - -
af80ab33 by Andreas Tille at 2026-02-15T13:57:31+01:00
Remove old FSF address
- - - - -
ac373086 by Andreas Tille at 2026-02-15T13:58:17+01:00
cme fix dpkg-control
- - - - -
0ed25492 by Andreas Tille at 2026-02-15T15:27:39+01:00
Upload to unstable
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/copyright
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
@@ -1,10 +1,14 @@
-mira (4.9.6-12) UNRELEASED; urgency=medium
+mira (4.9.6-12) unstable; urgency=medium
* d/watch: version=5
* Remove libboost-system-dev from Build-Depends
Closes: #1127240
+ * Really fix clean target
+ Closes: #1045311
+ * Remove old FSF address
+ * cme fix dpkg-control
- -- Andreas Tille <tille at debian.org> Fri, 13 Feb 2026 23:31:45 +0100
+ -- Andreas Tille <tille at debian.org> Sun, 15 Feb 2026 15:27:05 +0100
mira (4.9.6-11) unstable; urgency=medium
=====================================
debian/control
=====================================
@@ -1,26 +1,28 @@
Source: mira
+Standards-Version: 4.7.3
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Steffen Moeller <moeller at debian.org>,
- Andreas Tille <tille at debian.org>,
- Michael R. Crusoe <michael.crusoe at gmail.com>
+Uploaders:
+ Steffen Moeller <moeller at debian.org>,
+ Andreas Tille <tille at debian.org>,
+ Michael R. Crusoe <michael.crusoe at gmail.com>,
Section: science
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
- autoconf-archive,
- libbz2-dev,
- libexpat1-dev,
- libgoogle-perftools-dev [i386 amd64],
- flex,
- libfl-dev,
- xxd,
- zlib1g-dev,
- libboost-thread-dev,
- libboost-regex-dev,
- libboost-filesystem-dev,
- libboost-iostreams-dev
-Build-Depends-Indep: docbook-xsl,
- dblatex
-Standards-Version: 4.6.2
+Build-Depends:
+ debhelper-compat (= 13),
+ autoconf-archive,
+ libbz2-dev,
+ libexpat1-dev,
+ libgoogle-perftools-dev [i386 amd64],
+ flex,
+ libfl-dev,
+ xxd,
+ zlib1g-dev,
+ libboost-thread-dev,
+ libboost-regex-dev,
+ libboost-filesystem-dev,
+ libboost-iostreams-dev,
+Build-Depends-Indep:
+ docbook-xsl,
+ dblatex,
Vcs-Browser: https://salsa.debian.org/med-team/mira
Vcs-Git: https://salsa.debian.org/med-team/mira.git
Homepage: https://sourceforge.net/p/mira-assembler/wiki/Home/
@@ -28,10 +30,13 @@ Rules-Requires-Root: no
Package: mira-assembler
Architecture: any
-Depends: ${shlibs:Depends},
- ${misc:Depends}
-Recommends: mira-rfam-12s-rrna
-Suggests: mira-doc
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
+Recommends:
+ mira-rfam-12s-rrna,
+Suggests:
+ mira-doc,
# mira-examples,
Description: Whole Genome Shotgun and EST Sequence Assembler
The mira genome fragment assembler is a specialised assembler for
@@ -56,9 +61,12 @@ Description: Whole Genome Shotgun and EST Sequence Assembler
Package: mira-rfam-12s-rrna
Architecture: all
-Depends: ${misc:Depends}
-Suggests: mira-doc
-Pre-Depends: mira-assembler
+Depends:
+ ${misc:Depends},
+Suggests:
+ mira-doc,
+Pre-Depends:
+ mira-assembler,
Description: extract of RFAM 12 rRNA database
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
@@ -71,8 +79,10 @@ Package: mira-doc
Architecture: all
Multi-Arch: foreign
Section: doc
-Depends: ${misc:Depends}
-Suggests: mira-assembler
+Depends:
+ ${misc:Depends},
+Suggests:
+ mira-assembler,
Description: documentation for the mira assembler
The mira genome fragment assembler is a specialised assembler for
sequencing projects classified as 'hard' due to high number of similar
=====================================
debian/copyright
=====================================
@@ -46,8 +46,5 @@ License: GPL-2+
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
.
- You should have received a copy of the GNU General Public License
- along with this package; if not, write to the Free Software
- Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
-Comment: On Debian systems, the complete text of the GNU General Public
+ On Debian systems, the complete text of the GNU General Public
License version 2 can be found in `/usr/share/common-licenses/GPL-2'.
=====================================
debian/rules
=====================================
@@ -54,10 +54,10 @@ override_dh_installchangelogs:
#Must clean up the docs before cleaning out config.status
#Then scrub some junk not picked up by 'make clean'
override_dh_auto_clean:
+ if [ -f .version.bak ] ; then mv .version.bak .version; fi
( cd doc ; make clean ) || true
dh_auto_clean || true
find * -name Makefile -exec rm '{}' ';'
find * -name '*.xxd.H' -exec rm '{}' ';'
find * -name '*.par.H' -exec rm '{}' ';'
find * -name 'compileinfo.*' -exec rm '{}' ';'
- if [ -f .version.bak ] ; then mv .version.bak .version; fi
View it on GitLab: https://salsa.debian.org/med-team/mira/-/compare/78db69bccdaca0525b833c172864ae0deb7708c9...0ed25492ce881fde24158cac58bfb29d10c41e96
--
View it on GitLab: https://salsa.debian.org/med-team/mira/-/compare/78db69bccdaca0525b833c172864ae0deb7708c9...0ed25492ce881fde24158cac58bfb29d10c41e96
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