[med-svn] [Git][med-team/relion][debian/master] 5 commits: B-D on libtorch-dev

[Pierre Gruet (@pgt)]

Pierre Gruet pushed to branch debian/master at Debian Med / relion


Commits:
6a558fe5 by Pierre Gruet at 2026-02-22T16:35:25+01:00
B-D on libtorch-dev

- - - - -
41919987 by Pierre Gruet at 2026-02-22T16:39:09+01:00
Removing Priority: optional, which is default

- - - - -
148e7d23 by Pierre Gruet at 2026-02-22T16:39:17+01:00
Raising Standards version to 4.7.3

- - - - -
64d61a88 by Pierre Gruet at 2026-02-22T16:40:12+01:00
Updating changelog

- - - - -
c38bbeae by Pierre Gruet at 2026-02-22T16:43:11+01:00
Adding TODO about removing Eigen from package

- - - - -


2 changed files:

- debian/changelog
- debian/control


Changes:

=====================================
debian/changelog
=====================================
@@ -1,6 +1,13 @@
-relion (5.0.1-1) unstable; urgency=medium
+relion (5.0.1-1) UNRELEASED; urgency=medium
 
   * Team upload.
+  * B-D on libtorch-dev
+  * Raising Standards version to 4.7.3:
+    - Removing Priority: optional, which is default
+
+  TODO: repack without embedded copy of Eigen.
+
+  [ Yavor Doganov ]
   * New upstream release:
     + Fixes FTBFS with GCC 15 (Closes: #1097784).
   * debian/patches/0001-Repair-wrong-comment-sign...patch: Delete; was
@@ -13,15 +20,15 @@ relion (5.0.1-1) unstable; urgency=medium
     Python 2 to 3 as it's the core of on-the-fly processing.
   * debian/patches/system-eigen.patch: New; use the system Eigen library.
   * Run wrap-and-sort -ast.
-  * debian/control (Build-Depends): Remove fluid (unnecessary).  Add
-    libpng-dev, dh-sequence-python3, python3 and libeigen3-dev.
-    (relion) <Depends>: Add ctffind (<< 5).
-    <Recommends>: Add ghostscript (for generating PDF files), pbzip2,
-    xz-utils and zstd (for reading compressed MRC movies).
-    (relion-gui) <Depends>: Add ${python3:Depends} and python3-tk.
-    (Breaks, Replaces): Remove; obsolete.
-    (Rules-Requires-Root): Remove; it's the default.
-    (Standards-Version): Claim compliance with 4.7.2; no changes needed.
+  * debian/control
+    - (Build-Depends): Remove fluid (unnecessary).  Add libpng-dev,
+      dh-sequence-python3, python3 and libeigen3-dev.
+    - (relion) <Depends>: Add ctffind (<< 5). <Recommends>: Add ghostscript
+      (for generating PDF files), pbzip2, xz-utils and zstd (for reading
+      compressed MRC movies).
+    - (relion-gui) <Depends>: Add ${python3:Depends} and python3-tk.
+      (Breaks, Replaces): Remove; obsolete.
+      (Rules-Requires-Root): Remove; it's the default.
   * debian/rules: Enable full hardening.
     (CONFIGURE_COMMON): Remove redundant flags that are already set by
     debhelper's cmake build system.  Fix FTBFS with CMake 4 by adding


=====================================
debian/control
=====================================
@@ -4,7 +4,6 @@ Uploaders:
  Roland Fehrenbacher <rfehren at debian.org>,
  Andreas Tille <tille at debian.org>,
 Section: science
-Priority: optional
 Build-Depends:
  debhelper-compat (= 13),
  dh-sequence-python3,
@@ -14,9 +13,10 @@ Build-Depends:
  libfltk1.3-dev,
  libpng-dev,
  libtiff-dev,
+ libtorch-dev,
  mpi-default-dev,
  python3,
-Standards-Version: 4.7.2
+Standards-Version: 4.7.3
 Vcs-Browser: https://salsa.debian.org/med-team/relion
 Vcs-Git: https://salsa.debian.org/med-team/relion.git
 Homepage: https://www2.mrc-lmb.cam.ac.uk/relion/index.php/Main_Page



View it on GitLab: https://salsa.debian.org/med-team/relion/-/compare/141fba11f0f219b463f4b5dc7a3c545bf39f375a...c38bbeae796a1594eba33696878299fe6adf09ab

-- 
View it on GitLab: https://salsa.debian.org/med-team/relion/-/compare/141fba11f0f219b463f4b5dc7a3c545bf39f375a...c38bbeae796a1594eba33696878299fe6adf09ab
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