[med-svn] [Git][med-team/python-cobra][master] 4 commits: wrap-and-sort -ast
Alexandre Detiste (@detiste-guest)
gitlab at salsa.debian.org
Fri Feb 27 13:32:01 GMT 2026
Alexandre Detiste pushed to branch master at Debian Med / python-cobra
Commits:
9acdbf52 by Alexandre Detiste at 2026-02-27T14:29:52+01:00
wrap-and-sort -ast
- - - - -
69c17de2 by Alexandre Detiste at 2026-02-27T14:30:14+01:00
drop "Rules-Requires-Root: no": it is the default now
- - - - -
e6ca917a by Alexandre Detiste at 2026-02-27T14:30:40+01:00
bump Standards-Version to 4.7.3, drop Priority: tag
- - - - -
be3d931a by Alexandre Detiste at 2026-02-27T14:31:54+01:00
rewrite d/watch in v5 format
- - - - -
3 changed files:
- debian/control
- debian/tests/control
- debian/watch
Changes:
=====================================
debian/control
=====================================
@@ -1,56 +1,58 @@
Source: python-cobra
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Afif Elghraoui <afif at debian.org>
+Uploaders:
+ Afif Elghraoui <afif at debian.org>,
Section: python
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
- dh-sequence-python3,
- libglpk-dev,
- python3-dev,
- python3-setuptools,
- python3-depinfo,
- python3-numpy,
- python3-optlang (>= 1.7.0-1~),
- python3-ruamel.yaml,
- python3-pandas,
- python3-pip,
- python3-pipdeptree,
- python3-requests,
- python3-swiglpk (>= 5.0.8-1~),
- python3-tabulate,
- python3-sbml5,
- cython3,
- python3-pytest <!nocheck>,
- python3-pytest-benchmark <!nocheck>,
- python3-pytest-mock <!nocheck>,
- python3-jsonschema <!nocheck>,
- libsbml5-dev <!nocheck>,
- python3-matplotlib <!nocheck>,
- python3-platformdirs <!nocheck>,
- python3-diskcache <!nocheck>,
- python3-httpx <!nocheck>,
- python3-pydantic <!nocheck>,
- python3-rich <!nocheck>
-Standards-Version: 4.7.2
+Build-Depends:
+ debhelper-compat (= 13),
+ dh-sequence-python3,
+ cython3,
+ libglpk-dev,
+ libsbml5-dev <!nocheck>,
+ python3-depinfo,
+ python3-dev,
+ python3-diskcache <!nocheck>,
+ python3-httpx <!nocheck>,
+ python3-jsonschema <!nocheck>,
+ python3-matplotlib <!nocheck>,
+ python3-numpy,
+ python3-optlang (>= 1.7.0-1~),
+ python3-pandas,
+ python3-pip,
+ python3-pipdeptree,
+ python3-platformdirs <!nocheck>,
+ python3-pydantic <!nocheck>,
+ python3-pytest <!nocheck>,
+ python3-pytest-benchmark <!nocheck>,
+ python3-pytest-mock <!nocheck>,
+ python3-requests,
+ python3-rich <!nocheck>,
+ python3-ruamel.yaml,
+ python3-sbml5,
+ python3-setuptools,
+ python3-swiglpk (>= 5.0.8-1~),
+ python3-tabulate,
+Standards-Version: 4.7.3
Vcs-Browser: https://salsa.debian.org/med-team/python-cobra
Vcs-Git: https://salsa.debian.org/med-team/python-cobra.git
Homepage: https://opencobra.github.io/cobrapy/
-Rules-Requires-Root: no
Package: python3-cobra
-Architecture: any-amd64 arm64 armel armhf any-i386 mips mips64el mipsel ppc64el alpha hppa m68k powerpc powerpcspe ppc64 sh4 sparc64 x32
-Depends: ${shlibs:Depends},
- ${misc:Depends},
- ${python3:Depends},
- python-cobra-data (= ${source:Version}),
- python3-numpy,
- python3-ruamel.yaml,
- python3-pandas,
- python3-swiglpk,
- python3-tabulate,
- python3-sbml5
-Suggests: python3-matplotlib,
- qsopt-ex
+Architecture: any-amd64 any-i386 alpha arm64 armel armhf hppa m68k mips mips64el mipsel powerpc powerpcspe ppc64 ppc64el sh4 sparc64 x32
+Depends:
+ python-cobra-data (= ${source:Version}),
+ python3-numpy,
+ python3-pandas,
+ python3-ruamel.yaml,
+ python3-sbml5,
+ python3-swiglpk,
+ python3-tabulate,
+ ${misc:Depends},
+ ${python3:Depends},
+ ${shlibs:Depends},
+Suggests:
+ python3-matplotlib,
+ qsopt-ex,
Description: constraint-based modeling of biological networks with Python 3
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
used for genome-scale modeling of metabolic networks in both prokaryotes
@@ -63,7 +65,8 @@ Description: constraint-based modeling of biological networks with Python 3
Package: python-cobra-data
Architecture: all
Multi-Arch: foreign
-Depends: ${misc:Depends}
+Depends:
+ ${misc:Depends},
Description: constraint-based modeling of biological networks (data)
COnstraint-Based Reconstruction and Analysis (COBRA) methods are widely
used for genome-scale modeling of metabolic networks in both prokaryotes
=====================================
debian/tests/control
=====================================
@@ -1,11 +1,14 @@
-Tests: run-unit-test
-Depends: @,
- python3-cobra,
- python3-pytest,
- python3-pytest-benchmark,
- python3-jsonschema,
- python3-scipy,
- python3-sbml5,
- python3-pytest-mock,
- quilt
-Restrictions: allow-stderr
+Tests:
+ run-unit-test,
+Depends:
+ python3-cobra,
+ python3-jsonschema,
+ python3-pytest,
+ python3-pytest-benchmark,
+ python3-pytest-mock,
+ python3-sbml5,
+ python3-scipy,
+ quilt,
+ @,
+Restrictions:
+ allow-stderr,
=====================================
debian/watch
=====================================
@@ -1,5 +1,5 @@
-version=4
+Version: 5
-opts="uversionmangle=s/(a|b)(\d)$/\~$1$2/,filenamemangle=s/(?:.*\/)v?(\d[\d\.]*[ab]?[\d]?)\.tar\.gz/python\-cobra\-$1.tar.gz/" \
- https://github.com/opencobra/cobrapy/tags \
- (?:.*/)?v?(\d[\d\.]*[ab]?[\d]?)\.tar\.gz
+Template: GitHub
+Owner: opencobra
+Project: cobrapy
View it on GitLab: https://salsa.debian.org/med-team/python-cobra/-/compare/587179a9fbbd2d21f8eb96834ff5782df7bf21be...be3d931af18c5a810473b20c620d24c6ada20134
--
View it on GitLab: https://salsa.debian.org/med-team/python-cobra/-/compare/587179a9fbbd2d21f8eb96834ff5782df7bf21be...be3d931af18c5a810473b20c620d24c6ada20134
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260227/77d6ed4d/attachment-0001.htm>
More information about the debian-med-commit
mailing list