[med-svn] [Git][med-team/circos][master] 9 commits: d/control: replace libgd-gd2-perl by libgd-perl.
Étienne Mollier (@emollier)
gitlab at salsa.debian.org
Fri Jan 30 18:27:28 GMT 2026
Étienne Mollier pushed to branch master at Debian Med / circos
Commits:
1d3cadf1 by Étienne Mollier at 2026-01-30T19:06:42+01:00
d/control: replace libgd-gd2-perl by libgd-perl.
Closes: #1126360
- - - - -
5b3e3c08 by Étienne Mollier at 2026-01-30T19:07:46+01:00
d/control: drop redundant Priority: optional.
- - - - -
b2a56ebe by Étienne Mollier at 2026-01-30T19:08:03+01:00
d/control: drop redundant Rules-Requires-Root: no.
- - - - -
219efa4c by Étienne Mollier at 2026-01-30T19:08:23+01:00
d/control: declare compliance to standards version 4.7.3.
- - - - -
1e509c01 by Étienne Mollier at 2026-01-30T19:10:46+01:00
d/watch: convert to watch file version 5.
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19d3ac63 by Étienne Mollier at 2026-01-30T19:17:40+01:00
d/patches/*: normalize dep3 headers.
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595306ea by Étienne Mollier at 2026-01-30T19:18:42+01:00
d/rules: trim trailing whitespace
Gbp-Dch: ignore
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dde68e15 by Étienne Mollier at 2026-01-30T19:26:03+01:00
d/control: point to the https home page.
- - - - -
5eadeecf by Étienne Mollier at 2026-01-30T19:27:10+01:00
d/changelog: ready for upload to unstable.
- - - - -
8 changed files:
- debian/changelog
- debian/control
- debian/patches/fix_config_path.patch
- debian/patches/fix_examples
- debian/patches/fix_manpage
- debian/patches/fix_pod_syntax.patch
- debian/rules
- debian/watch
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,16 @@
+circos (0.69.9+dfsg-3) unstable; urgency=medium
+
+ * Team upload.
+ * d/control: replace libgd-gd2-perl by libgd-perl. (Closes: #1126360)
+ * d/control: drop redundant Priority: optional.
+ * d/control: drop redundant Rules-Requires-Root: no.
+ * d/control: declare compliance to standards version 4.7.3.
+ * d/control: point to the https home page.
+ * d/patches/*: normalize dep3 headers.
+ * d/watch: convert to watch file version 5.
+
+ -- Étienne Mollier <emollier at debian.org> Fri, 30 Jan 2026 19:26:50 +0100
+
circos (0.69.9+dfsg-2) unstable; urgency=medium
* Fix config path and install example configuration as additional
=====================================
debian/control
=====================================
@@ -3,13 +3,11 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
Uploaders: Olivier Sallou <osallou at debian.org>,
Andreas Tille <tille at debian.org>
Section: science
-Priority: optional
Build-Depends: debhelper-compat (= 13)
-Standards-Version: 4.5.0
+Standards-Version: 4.7.3
Vcs-Browser: https://salsa.debian.org/med-team/circos
Vcs-Git: https://salsa.debian.org/med-team/circos.git
-Homepage: http://circos.ca/
-Rules-Requires-Root: no
+Homepage: https://circos.ca/
Package: circos
Architecture: all
@@ -21,7 +19,7 @@ Depends: ${misc:Depends},
libcarp-always-perl,
libconfig-general-perl,
libdata-dumper-simple-perl,
- libgd-gd2-perl,
+ libgd-perl,
libgetopt-simple-perl,
libmath-bezier-perl,
libmath-round-perl,
=====================================
debian/patches/fix_config_path.patch
=====================================
@@ -1,9 +1,9 @@
Description: Fix config path
+ Comment: May be it would be better to do in d/rules some
+ find debian/circos -type f | xargs sed -i 's:include etc/:include :g'
Bug-Debian: https://bugs.debian.org/962247
Author: Andreas Tille <tille at debian.org>
-Last-Update: Fri, 05 Jun 2020 08:43:04 +0200
-Comment: May be it would be better to do in d/rules some
- find debian/circos -type f | xargs sed -i 's:include etc/:include :g'
+Last-Update: 2020-06-05
--- a/bin/circos
+++ b/bin/circos
=====================================
debian/patches/fix_examples
=====================================
@@ -4,7 +4,7 @@ Description: etc sub directory is hard coded
in /etc/circos. This path is already added to search
path.
Author: Olivier Sallou <osallou at debian.org>
-Last-Updated: 2012-09-21
+Last-Update: 2012-09-21
Forwarded: not-needed
--- a/example/run
+++ b/example/run
=====================================
debian/patches/fix_manpage
=====================================
@@ -1,8 +1,8 @@
Subject: fix errors from pod2man result
Description: Perl file used as source for man page contains errors.
Author: Olivier Sallou <osallou at debian.org>
-Last-Updated: 2013-05-20
-Forwarded: No
+Last-Update: 2013-05-20
+Forwarded: no
--- a/lib/Circos.pm
+++ b/lib/Circos.pm
@@ -7,7 +7,7 @@ our $VERSION_DATE = "31 July 2017";
=====================================
debian/patches/fix_pod_syntax.patch
=====================================
@@ -1,5 +1,5 @@
Author: Andreas Tille <tille at debian.org>
-Last-Update: Fri, 20 May 2016 13:25:54 +0200
+Last-Update: 2016-05-20
Description: Add missing over which should fix
=back without =over
when creating manpages
=====================================
debian/rules
=====================================
@@ -28,4 +28,3 @@ override_dh_link:
rm $${cfgfile} ; \
dh_link etc/$(DEB_SOURCE)/`basename $${cfgfile}` usr/share/doc/$(DEB_SOURCE)/examples/etc/`basename $${cfgfile}` ; \
done
-
=====================================
debian/watch
=====================================
@@ -1,3 +1,9 @@
-version=4
-opts="uversionmangle=s/\-/\./,repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g,repack,compression=xz" \
- http://circos.ca/software/download .*/distribution/circos-([-.\d]*)\.tgz
+Version: 5
+
+Source: https://circos.ca/software/download
+Matching-Pattern: .*/distribution/circos-([-.\d]*)\.tgz
+Compression: xz
+Dversionmangle: s/\+dfsg//g
+Repack: yes
+Repacksuffix: +dfsg
+Uversionmangle: s/\-/\./
View it on GitLab: https://salsa.debian.org/med-team/circos/-/compare/f4745b9b1cbd319d4ff306443f7187ec0e94ed95...5eadeecfea86880f0a5d1826e369e4aceb9a5ae4
--
View it on GitLab: https://salsa.debian.org/med-team/circos/-/compare/f4745b9b1cbd319d4ff306443f7187ec0e94ed95...5eadeecfea86880f0a5d1826e369e4aceb9a5ae4
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