[med-svn] [Git][med-team/snakemake][debian-v7] remove temporary test, record its findings
Rebecca N. Palmer (@rnpalmer-guest)
gitlab at salsa.debian.org
Wed Jul 1 22:10:46 BST 2026
Rebecca N. Palmer pushed to branch debian-v7 at Debian Med / snakemake
Commits:
d7c72f0e by Rebecca N. Palmer at 2026-07-01T22:10:28+01:00
remove temporary test, record its findings
- - - - -
3 changed files:
- debian/changelog
- debian/patches/urljoin_slashes.patch
- debian/rules
Changes:
=====================================
debian/changelog
=====================================
@@ -1,9 +1,10 @@
-snakemake (7.32.4-12) UNRELEASED; urgency=medium
+snakemake (7.32.4-12) unstable; urgency=medium
* Re-enable R/rpy2 tests.
- * Fix config schema loading from local files. (Closes: #1141070)
+ * Make config schema loading from local files
+ Python 3.14 compatible. (Closes: #1141070)
- -- Rebecca N. Palmer <rebecca_palmer at zoho.com> Wed, 01 Jul 2026 19:45:01 +0100
+ -- Rebecca N. Palmer <rebecca_palmer at zoho.com> Wed, 01 Jul 2026 22:06:28 +0100
snakemake (7.32.4-11) unstable; urgency=medium
=====================================
debian/patches/urljoin_slashes.patch
=====================================
@@ -1,5 +1,7 @@
Description: Include the /// in file: config URLs
+Python 3.14 no longer automatically does this
+
Author: Rebecca N. Palmer <rebecca_palmer at zoho.com>
Bug-Debian: https://bugs.debian.org/1141070
Forwarded: no
=====================================
debian/rules
=====================================
@@ -47,9 +47,7 @@ export SPHINXBUILD=/usr/share/sphinx/scripts/python3/sphinx-build
dh $@ --with sphinxdoc --buildsystem=pybuild
# LC_ALL is for reproducibility
-# the first python3 is a test related to #1141070 (in trixie/python3.13, both of these get a triple slash)
execute_after_dh_auto_build:
- python3 -c "import urllib.parse;print(urllib.parse.urljoin('file:','/b/a.html'),urllib.parse.urljoin('file://','/b/a.html'))"
PYTHONPATH=$(shell pybuild --print build_dir --interpreter python3) \
cd docs && LC_ALL=C.UTF-8 LANGUAGE=C.UTF-8 make html
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/d7c72f0e2d4c84c421bf79d781e63b6e49622f1e
--
View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/commit/d7c72f0e2d4c84c421bf79d781e63b6e49622f1e
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