Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
740503c4 by Andreas Tille at 2026-07-05T01:42:15+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
+Last-Update: Sun, 05 Jul 2026 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -7,25 +7,25 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
adun.app | 13 | {bio} |
biojava-live | 12 | {bio-dev} |
mrtrix3 | 12 | {imaging} |
- oscar | 12 | {tools,practice,data} |
+ oscar | 12 | {data,practice,tools} |
icb-utils | 11 | {bio-dev} |
sight | 11 | {imaging} |
gnumed-server | 10 | {covid-19,practice} |
orthanc-gdcm | 10 | {imaging} |
pixelmed | 10 | {imaging} |
- embassy-domsearch | 9 | {cloud,bio} |
+ embassy-domsearch | 9 | {bio,cloud} |
ants | 8 | {imaging} |
embassy-domainatrix | 8 | {cloud,bio} |
embassy-domalign | 8 | {cloud,bio} |
saint | 8 | {bio} |
- proalign | 7 | {bio,bio-phylogeny} |
+ proalign | 7 | {bio-phylogeny,bio} |
sight | 7 | {imaging} |
beast-mcmc | 6 | {bio,bio-phylogeny} |
biojava6-live | 6 | {bio-dev} |
- bio-tradis | 6 | {bio,bio-dev} |
- dextractor | 6 | {bio,covid-19} |
+ bio-tradis | 6 | {bio-dev,bio} |
+ dextractor | 6 | {covid-19,bio} |
ipig | 6 | {bio} |
- melting | 6 | {bio,cloud} |
+ melting | 6 | {cloud,bio} |
orthanc-mysql | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
rambo-k | 6 | {bio} |
@@ -37,7 +37,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
libjloda-java | 5 | {bio-dev} |
malt | 5 | {bio} |
megan-ce | 5 | {bio} |
- phyutility | 5 | {cloud,bio} |
+ phyutility | 5 | {bio,cloud} |
piler | 5 | {bio} |
rtax | 5 | {bio,cloud} |
runcircos-gui | 5 | {bio} |
@@ -46,15 +46,15 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
spread-phy | 5 | {bio,bio-phylogeny} |
surankco | 5 | {bio} |
surpyvor | 5 | {bio} |
- treeview | 5 | {bio-phylogeny,bio} |
+ treeview | 5 | {bio,bio-phylogeny} |
ctffind | 4 | {bio} |
lamarc | 4 | {bio} |
mauve-aligner | 4 | {bio} |
- plasmidid | 4 | {bio,covid-19} |
+ plasmidid | 4 | {covid-19,bio} |
rdp-alignment | 4 | {bio} |
savvy | 4 | {bio} |
- thesias | 4 | {covid-19,bio} |
- tophat-recondition | 4 | {bio,covid-19} |
+ thesias | 4 | {bio,covid-19} |
+ tophat-recondition | 4 | {covid-19,bio} |
brig | 3 | {bio} |
htscodecs | 3 | {covid-19,bio-dev} |
insighttoolkit5 | 3 | {imaging-dev} |
@@ -78,7 +78,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
python-cgelib | 2 | {bio-dev} |
acedb | 1 | {bio,cloud} |
cmtk | 1 | {imaging} |
- cufflinks | 1 | {bio,cloud} |
+ cufflinks | 1 | {cloud,bio} |
elastix | 1 | {imaging} |
libbiosoup-dev | 1 | {bio-dev} |
libbpp-phyl | 1 | {bio-dev} |
@@ -89,7 +89,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
librdp-taxonomy-tree-java | 1 | {bio-dev} |
maxflow | 1 | {imaging-dev} |
rdp-classifier | 1 | {bio} |
- varscan | 1 | {covid-19,bio} |
+ varscan | 1 | {bio,covid-19} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
@@ -101,7 +101,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbio-mage-utils-perl | 0 | {bio-dev} |
libbioparser-dev | 0 | {bio-dev} |
libbpp-phyl-omics | 0 | {bio-dev} |
@@ -111,7 +111,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
libchado-perl | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmuscle | 0 | {bio-dev} |
@@ -122,14 +122,14 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
python-seqcluster | 0 | {bio} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
resfinder-db | 0 | {bio} |
savvy | 0 | {bio-dev} |
sbmltoolbox | 0 | {bio-dev} |
@@ -138,10 +138,10 @@ Last-Update: Sat, 04 Jul 2026 13:42:04 +0000
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
trace2dbest | 0 | {bio} |
- vienna-rna | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(166 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
+Last-Update: Sun, 05 Jul 2026 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------
@@ -15,34 +15,34 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
giac | 57 | {mathematics} |
muparser | 50 | {mathematics-dev} |
imview | 44 | {viewing} |
- guiqwt | 39 | {numericalcomputation,viewing} |
+ guiqwt | 39 | {viewing,numericalcomputation} |
setzer | 34 | {typesetting} |
- persalys | 33 | {statistics,mathematics,engineering} |
+ persalys | 33 | {engineering,statistics,mathematics} |
pyzo | 32 | {numericalcomputation} |
sardana | 30 | {dataacquisition} |
teem | 30 | {imageanalysis} |
apophenia | 28 | {statistics} |
colpack | 26 | {numericalcomputation} |
palp | 26 | {mathematics} |
- persalys | 26 | {mathematics,engineering,statistics} |
+ persalys | 26 | {statistics,mathematics,engineering} |
adolc | 25 | {numericalcomputation} |
- lxi-tools | 25 | {dataacquisition,engineering} |
+ lxi-tools | 25 | {engineering,dataacquisition} |
ntl | 25 | {mathematics-dev} |
sketch | 25 | {typesetting} |
- flann | 24 | {mathematics-dev,engineering-dev} |
- coinor-symphony | 23 | {logic,mathematics,numericalcomputation} |
+ flann | 24 | {engineering-dev,mathematics-dev} |
+ coinor-symphony | 23 | {numericalcomputation,logic,mathematics} |
feedgnuplot | 21 | {viewing} |
- debian-science | 20 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
+ debian-science | 20 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
dune-uggrid | 20 | {mathematics-dev} |
libmatio | 20 | {mathematics-dev} |
- python-escript | 20 | {simulations,numericalcomputation,engineering} |
+ python-escript | 20 | {numericalcomputation,simulations,engineering} |
arduino-mk | 19 | {robotics} |
eccodes | 19 | {meteorology-dev} |
libcvd | 19 | {imageanalysis} |
ppl | 18 | {numericalcomputation} |
- toulbar2 | 18 | {mathematics,numericalcomputation,physics,logic} |
- fftw | 17 | {mathematics-dev,meteorology-dev,physics-dev} |
- getdp | 17 | {mathematics,simulations,engineering} |
+ toulbar2 | 18 | {logic,physics,mathematics,numericalcomputation} |
+ fftw | 17 | {meteorology-dev,mathematics-dev,physics-dev} |
+ getdp | 17 | {simulations,mathematics,engineering} |
libm4ri | 17 | {mathematics-dev} |
picosat | 17 | {logic} |
xygrib | 17 | {meteorology} |
@@ -50,31 +50,31 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
eccodes | 15 | {meteorology,meteorology-dev} |
grads | 15 | {meteorology} |
gts | 15 | {viewing-dev} |
- libvigraimpex | 15 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 15 | {machine-learning,imageanalysis-dev} |
psurface | 15 | {numericalcomputation} |
- debian-science | 14 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 14 | {machine-learning,economics,physics,nanoscale-physics} |
sat4j | 14 | {logic} |
debian-science | 13 | {electrophysiology} |
- debian-science | 13 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 13 | {neuroscience-cognitive,machine-learning} |
debian-science | 13 | {tools} |
alberta | 12 | {engineering-dev} |
ipe-tools | 12 | {typesetting} |
- jeuclid | 12 | {viewing,typesetting} |
+ jeuclid | 12 | {typesetting,viewing} |
mseed2sac | 12 | {dataacquisition-dev} |
rubiks | 12 | {mathematics,geometry} |
bossa | 11 | {devices} |
- matlab-support | 11 | {mathematics,numericalcomputation} |
+ matlab-support | 11 | {numericalcomputation,mathematics} |
opencascade | 11 | {simulations} |
vdt | 11 | {mathematics-dev} |
cliquer | 10 | {mathematics-dev} |
feff85exafs | 9 | {chemistry} |
iml | 9 | {mathematics-dev} |
libhomfly | 9 | {mathematics-dev} |
- libitpp | 9 | {engineering-dev,mathematics-dev} |
+ libitpp | 9 | {mathematics-dev,engineering-dev} |
lrcalc | 9 | {mathematics-dev} |
rw | 9 | {mathematics-dev} |
chemical-structures | 8 | {chemistry} |
- fftw | 8 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 8 | {meteorology-dev,mathematics-dev,physics-dev} |
newmat | 8 | {mathematics-dev} |
python-cdo | 8 | {meteorology} |
rheolef | 8 | {mathematics} |
@@ -83,7 +83,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
apertium | 7 | {linguistics} |
auto-07p | 7 | {mathematics} |
cliquer | 7 | {mathematics} |
- coinmp | 7 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 7 | {numericalcomputation,logic,mathematics-dev} |
hdf-eos4 | 7 | {meteorology-dev} |
hdf-eos5 | 7 | {meteorology-dev} |
libmatheval | 7 | {mathematics} |
@@ -101,17 +101,17 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
libm4rie | 6 | {mathematics-dev} |
ncl | 6 | {meteorology-dev} |
cg3 | 5 | {linguistics} |
- debian-science | 5 | {statistics,economics,nanoscale-physics,physics} |
+ debian-science | 5 | {economics,physics,statistics,nanoscale-physics} |
dxsamples | 5 | {nanoscale-physics} |
libcvd | 5 | {imageanalysis-dev} |
liblbfgs | 5 | {mathematics-dev} |
- liblxi | 5 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 5 | {engineering-dev,dataacquisition-dev} |
libmatheval | 5 | {mathematics-dev} |
libzn-poly | 5 | {mathematics-dev} |
polylib | 5 | {mathematics} |
python-aws-xray-sdk | 5 | {dataacquisition-dev} |
ratpoints | 5 | {mathematics-dev} |
- spfft | 5 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 5 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
uctodata | 5 | {linguistics} |
urdfdom-headers | 5 | {robotics-dev} |
veccore | 5 | {mathematics-dev} |
@@ -127,7 +127,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
qd | 4 | {mathematics-dev} |
ros-rosconsole | 4 | {robotics-dev} |
silo-llnl | 4 | {engineering-dev} |
- trilinos | 4 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 4 | {physics-dev,engineering-dev,mathematics-dev} |
vlfeat | 4 | {imageanalysis-dev} |
xppaut | 4 | {neuroscience-modeling} |
coda | 3 | {meteorology} |
@@ -138,9 +138,9 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
fpzip | 3 | {meteorology} |
gadap | 3 | {meteorology-dev} |
gemmlowp | 3 | {mathematics-dev} |
- hpcc | 3 | {distributedcomputing,numericalcomputation} |
+ hpcc | 3 | {numericalcomputation,distributedcomputing} |
libdogleg | 3 | {mathematics-dev} |
- libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 3 | {viewing-dev,engineering-dev} |
libtnt | 3 | {mathematics-dev} |
meshsdfilter | 3 | {mathematics-dev} |
neartree | 3 | {numericalcomputation,mathematics-dev} |
@@ -198,7 +198,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
metview | 1 | {meteorology} |
nrn-mod2c | 1 | {biology} |
openctm | 1 | {physics-dev} |
- python-escript | 1 | {numericalcomputation,engineering,simulations} |
+ python-escript | 1 | {simulations,engineering,numericalcomputation} |
ros-collada-urdf | 1 | {robotics} |
ros-ros-environment | 1 | {robotics-dev} |
schroedinger-coordgenlibs | 1 | {nanoscale-physics-dev,chemistry} |
@@ -224,7 +224,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
apertium-urd-hin | 0 | {linguistics} |
apriltag | 0 | {robotics-dev} |
atlas-ecmwf | 0 | {meteorology-dev} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -234,7 +234,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
glpk-java | 0 | {mathematics-dev} |
- hepmc3 | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
irstlm | 0 | {linguistics} |
libfolia | 0 | {linguistics} |
libquantum | 0 | {numericalcomputation} |
@@ -243,7 +243,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
mbtserver | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
opengv | 0 | {geometry} |
@@ -259,7 +259,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
spaghetti | 0 | {geography} |
@@ -276,7 +276,7 @@ Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
visp-images | 0 | {robotics-dev} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
tamuanova | -1 | {statistics} |
(307 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 04 Jul 2026 13:42:05 +0000
+Last-Update: Sun, 05 Jul 2026 01:42:04 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/740503c467b5849fcfd4125b55867c1247dc4b66
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/740503c467b5849fcfd4125b55867c1247dc4b66
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