[med-svn] [Git][med-team/biomaj3][master] 5 commits: Update standards version to 4.7.4, no changes needed.

[Alexandre Detiste (@detiste-guest)]

Alexandre Detiste pushed to branch master at Debian Med / biomaj3


Commits:
21a3e115 by Alexandre Detiste at 2026-06-17T11:00:36+01:00
Update standards version to 4.7.4, no changes needed.

Upgrade checklist verified:
 4.7.3 → 4.7.4:
  * Package is not in non-free-firmware

Changes-By: lintian-brush
Fixes: lintian: source: out-of-date-standards-version 4.7.3 (released 2025-12-23) (current is 4.7.4.1)
See-also: https://lintian.debian.org/tags/out-of-date-standards-version.html

- - - - -
6ac06dc2 by Alexandre Detiste at 2026-06-17T12:02:55+02:00
wrap-and-sort -ast

- - - - -
a49ca0b8 by Alexandre Detiste at 2026-06-17T12:04:28+02:00
use dh-cruft to register & purge /var/{cache,lib,log}/python3-biomaj3

- - - - -
81ef5643 by Alexandre Detiste at 2026-06-17T12:05:02+02:00
rewrite d/watch in v5 format

- - - - -
7b7a41bd by Alexandre Detiste at 2026-06-17T12:05:44+02:00
release

- - - - -


5 changed files:

- debian/changelog
- debian/control
- debian/python3-biomaj3.dirs
- + debian/python3-biomaj3.purge
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+biomaj3 (3.1.24-4) unstable; urgency=medium
+
+  * Team upload.
+  * Use dh-cruft to register & purge /var/{cache,lib,log}/python3-biomaj3
+  * Update standards version to 4.7.4, no changes needed.
+  * Rewrite d/watch in v5 format
+
+ -- Alexandre Detiste <tchet at debian.org>  Wed, 17 Jun 2026 12:05:17 +0200
+
 biomaj3 (3.1.24-3) unstable; urgency=medium
 
   * Team upload.


=====================================
debian/control
=====================================
@@ -1,38 +1,44 @@
 Source: biomaj3
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Olivier Sallou <osallou at debian.org>
+Uploaders:
+ Olivier Sallou <osallou at debian.org>,
 Section: python
 Testsuite: autopkgtest-pkg-python
 # python3-influxdb removed as workaround for python-influxdb bug see changelog
-Build-Depends: debhelper-compat (= 13),
-               dh-sequence-python3,
-               python3-all,
-               python3-bcrypt,
-               python3-pytest,
-               python3-pymongo,
-               python3-redis,
-               python3-setuptools,
-               python3-yapsy,
-               python3-biomaj3-core,
-               python3-biomaj3-zipkin,
-               python3-biomaj3-download,
-               python3-biomaj3-user,
-               python3-biomaj3-process
-Standards-Version: 4.7.3
+Build-Depends:
+ debhelper-compat (= 13),
+ dh-sequence-cruft,
+ dh-sequence-python3,
+ python3-all,
+ python3-bcrypt,
+ python3-biomaj3-core,
+ python3-biomaj3-download,
+ python3-biomaj3-process,
+ python3-biomaj3-user,
+ python3-biomaj3-zipkin,
+ python3-pymongo,
+ python3-pytest,
+ python3-redis,
+ python3-setuptools,
+ python3-yapsy,
+Standards-Version: 4.7.4
 Vcs-Browser: https://salsa.debian.org/med-team/biomaj3
 Vcs-Git: https://salsa.debian.org/med-team/biomaj3.git
 Homepage: https://github.com/genouest/biomaj
 
 Package: python3-biomaj3
 Architecture: all
-Depends: ${misc:Depends},
-         ${python3:Depends},
-         unzip
-Recommends: ${python3:Recommends}
-Suggests: ${python3:Suggests},
-          python3-biomaj3-cli,
-          python3-gunicorn,
-          redis-server
+Depends:
+ unzip,
+ ${misc:Depends},
+ ${python3:Depends},
+Recommends:
+ ${python3:Recommends},
+Suggests:
+ python3-biomaj3-cli,
+ python3-gunicorn,
+ redis-server,
+ ${python3:Suggests},
 Description: BioMAJ workflow management library
  BioMAJ downloads remote data banks, checks their status and applies
  transformation workflows, with consistent state, to provide ready-to-use


=====================================
debian/python3-biomaj3.dirs
=====================================
@@ -1,8 +1,7 @@
 etc/python3-biomaj3
-var/lib/python3-biomaj3
 usr/share/python3-biomaj3
-var/log/python3-biomaj3
 usr/share/python3-biomaj3/process
 var/cache/python3-biomaj3/data
 var/cache/python3-biomaj3/lock
-
+var/lib/python3-biomaj3
+var/log/python3-biomaj3


=====================================
debian/python3-biomaj3.purge
=====================================
@@ -0,0 +1,4 @@
+/var/cache/python3-biomaj3/
+/var/cache/python3-biomaj3/
+/var/lib/python3-biomaj3/
+/var/log/python3-biomaj3/


=====================================
debian/watch
=====================================
@@ -1,3 +1,5 @@
-version=4
-opts="repack,compression=xz,filenamemangle=s/.+\/v?(\d\S+)\.tar\.gz/biomaj3-$1\.tar\.gz/" \
-  https://github.com/genouest/biomaj/tags .*/v?(\d\S+)\.tar\.gz
+Version: 5
+
+Source: https://github.com/genouest/biomaj/tags
+Matching-Pattern: .*/v?(\d\S+)\.tar\.gz
+Filenamemangle: s/.+\/v?(\d\S+)\.tar\.gz/biomaj3-$1\.tar\.gz/



View it on GitLab: https://salsa.debian.org/med-team/biomaj3/-/compare/9c68fc31efcf85636cfd6892c4cc33a26d203fca...7b7a41bd8ade40f650f3098182d04d976a81e22f

-- 
View it on GitLab: https://salsa.debian.org/med-team/biomaj3/-/compare/9c68fc31efcf85636cfd6892c4cc33a26d203fca...7b7a41bd8ade40f650f3098182d04d976a81e22f
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