Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
fe360cee by Andreas Tille at 2026-06-28T01:42:25+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
+Last-Update: Sun, 28 Jun 2026 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -8,34 +8,34 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
biojava-live | 12 | {bio-dev} |
icb-utils | 12 | {bio-dev} |
orthanc-gdcm | 11 | {imaging} |
- oscar | 11 | {tools,practice,data} |
+ oscar | 11 | {data,practice,tools} |
gnumed-server | 10 | {covid-19,practice} |
mrtrix3 | 10 | {imaging} |
sight | 10 | {imaging} |
- embassy-domsearch | 9 | {cloud,bio} |
+ embassy-domsearch | 9 | {bio,cloud} |
embassy-domainatrix | 8 | {cloud,bio} |
embassy-domalign | 8 | {cloud,bio} |
saint | 8 | {bio} |
- dextractor | 7 | {bio,covid-19} |
+ dextractor | 7 | {covid-19,bio} |
pixelmed | 7 | {imaging} |
beast-mcmc | 6 | {bio,bio-phylogeny} |
- bio-tradis | 6 | {bio,bio-dev} |
+ bio-tradis | 6 | {bio-dev,bio} |
ipig | 6 | {bio} |
libdivsufsort | 6 | {bio-dev} |
libjloda-java | 6 | {bio-dev} |
malt | 6 | {bio} |
megan-ce | 6 | {bio} |
- melting | 6 | {bio,cloud} |
+ melting | 6 | {cloud,bio} |
orthanc-mysql | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
- proalign | 6 | {bio,bio-phylogeny} |
+ proalign | 6 | {bio-phylogeny,bio} |
sga | 6 | {bio} |
sprai | 6 | {bio} |
- treeview | 6 | {bio-phylogeny,bio} |
+ treeview | 6 | {bio,bio-phylogeny} |
ants | 5 | {imaging} |
biojava6-live | 5 | {bio-dev} |
fastml | 5 | {bio} |
- phyutility | 5 | {cloud,bio} |
+ phyutility | 5 | {bio,cloud} |
piler | 5 | {bio} |
rtax | 5 | {bio,cloud} |
runcircos-gui | 5 | {bio} |
@@ -57,25 +57,25 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
savvy | 4 | {bio} |
surankco | 4 | {bio} |
surpyvor | 4 | {bio} |
- thesias | 4 | {covid-19,bio} |
+ thesias | 4 | {bio,covid-19} |
brig | 3 | {bio} |
htscodecs | 3 | {covid-19,bio-dev} |
libpal-java | 3 | {bio-dev} |
mhap | 3 | {bio-ngs,bio} |
pigx-rnaseq | 3 | {bio,covid-19} |
- plasmidid | 3 | {bio,covid-19} |
+ plasmidid | 3 | {covid-19,bio} |
plasmidseeker | 3 | {bio} |
skesa | 3 | {bio} |
soapaligner | 3 | {bio} |
soapsnp | 3 | {bio} |
suitename | 3 | {bio} |
- tophat-recondition | 3 | {bio,covid-19} |
+ tophat-recondition | 3 | {covid-19,bio} |
cmtk | 2 | {imaging} |
libbpp-core | 2 | {bio-dev} |
librg-utils-perl | 2 | {bio} |
maxflow | 2 | {imaging-dev} |
acedb | 1 | {bio,cloud} |
- cufflinks | 1 | {bio,cloud} |
+ cufflinks | 1 | {cloud,bio} |
elastix | 1 | {imaging} |
emboss-explorer | 1 | {bio} |
getdata | 1 | {bio} |
@@ -99,7 +99,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbio-mage-utils-perl | 0 | {bio-dev} |
libbioparser-dev | 0 | {bio-dev} |
libbpp-phyl-omics | 0 | {bio-dev} |
@@ -109,7 +109,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
libchado-perl | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
@@ -121,14 +121,14 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
libxdf | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
python-seqcluster | 0 | {bio} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
resfinder-db | 0 | {bio} |
savvy | 0 | {bio-dev} |
sbmltoolbox | 0 | {bio-dev} |
@@ -137,11 +137,11 @@ Last-Update: Sat, 27 Jun 2026 13:42:04 +0000
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
trace2dbest | 0 | {bio} |
- varscan | 0 | {covid-19,bio} |
- vienna-rna | 0 | {bio,covid-19} |
+ varscan | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(166 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
+Last-Update: Sun, 28 Jun 2026 01:42:05 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------
@@ -15,49 +15,49 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
giac | 55 | {mathematics} |
imview | 44 | {viewing} |
muparser | 43 | {mathematics-dev} |
- guiqwt | 40 | {numericalcomputation,viewing} |
+ guiqwt | 40 | {viewing,numericalcomputation} |
setzer | 36 | {typesetting} |
pyzo | 33 | {numericalcomputation} |
apophenia | 31 | {statistics} |
- persalys | 29 | {statistics,mathematics,engineering} |
+ persalys | 29 | {engineering,statistics,mathematics} |
sardana | 28 | {dataacquisition} |
palp | 26 | {mathematics} |
teem | 26 | {imageanalysis} |
colpack | 25 | {numericalcomputation} |
sketch | 25 | {typesetting} |
adolc | 24 | {numericalcomputation} |
- lxi-tools | 24 | {dataacquisition,engineering} |
- flann | 23 | {mathematics-dev,engineering-dev} |
+ lxi-tools | 24 | {engineering,dataacquisition} |
+ flann | 23 | {engineering-dev,mathematics-dev} |
ntl | 23 | {mathematics-dev} |
arduino-mk | 22 | {robotics} |
feedgnuplot | 22 | {viewing} |
- persalys | 21 | {mathematics,engineering,statistics} |
- python-escript | 21 | {simulations,numericalcomputation,engineering} |
- coinor-symphony | 20 | {logic,mathematics,numericalcomputation} |
+ persalys | 21 | {statistics,mathematics,engineering} |
+ python-escript | 21 | {numericalcomputation,simulations,engineering} |
+ coinor-symphony | 20 | {numericalcomputation,logic,mathematics} |
dune-uggrid | 20 | {mathematics-dev} |
- getdp | 20 | {mathematics,simulations,engineering} |
- debian-science | 19 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
+ getdp | 20 | {simulations,mathematics,engineering} |
+ debian-science | 19 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
ppl | 19 | {numericalcomputation} |
libmatio | 18 | {mathematics-dev} |
xygrib | 18 | {meteorology} |
libm4ri | 17 | {mathematics-dev} |
- toulbar2 | 17 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 17 | {logic,physics,mathematics,numericalcomputation} |
eccodes | 16 | {meteorology,meteorology-dev} |
- fftw | 16 | {mathematics-dev,meteorology-dev,physics-dev} |
+ fftw | 16 | {meteorology-dev,mathematics-dev,physics-dev} |
flintqs | 16 | {mathematics} |
libcvd | 16 | {imageanalysis} |
eccodes | 15 | {meteorology-dev} |
- libvigraimpex | 15 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 15 | {machine-learning,imageanalysis-dev} |
picosat | 15 | {logic} |
grads | 14 | {meteorology} |
psurface | 13 | {numericalcomputation} |
bossa | 12 | {devices} |
- debian-science | 12 | {machine-learning,nanoscale-physics,economics,physics} |
- debian-science | 12 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 12 | {machine-learning,economics,physics,nanoscale-physics} |
+ debian-science | 12 | {neuroscience-cognitive,machine-learning} |
gts | 12 | {viewing-dev} |
ipe-tools | 12 | {typesetting} |
- jeuclid | 12 | {viewing,typesetting} |
- matlab-support | 12 | {mathematics,numericalcomputation} |
+ jeuclid | 12 | {typesetting,viewing} |
+ matlab-support | 12 | {numericalcomputation,mathematics} |
mseed2sac | 12 | {dataacquisition-dev} |
sat4j | 12 | {logic} |
debian-science | 11 | {electrophysiology} |
@@ -70,13 +70,13 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
lrcalc | 10 | {mathematics-dev} |
rubiks | 10 | {mathematics,geometry} |
vdt | 10 | {mathematics-dev} |
- libitpp | 9 | {engineering-dev,mathematics-dev} |
+ libitpp | 9 | {mathematics-dev,engineering-dev} |
chemical-structures | 8 | {chemistry} |
iml | 8 | {mathematics-dev} |
libhomfly | 8 | {mathematics-dev} |
pcl | 8 | {robotics-dev} |
rw | 8 | {mathematics-dev} |
- fftw | 7 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 7 | {meteorology-dev,mathematics-dev,physics-dev} |
gf2x | 7 | {mathematics-dev} |
ncl | 7 | {meteorology} |
python-cdo | 7 | {meteorology} |
@@ -86,7 +86,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
toon | 7 | {numericalcomputation} |
apertium | 6 | {linguistics} |
auto-07p | 6 | {mathematics} |
- coinmp | 6 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 6 | {numericalcomputation,logic,mathematics-dev} |
hdf-eos4 | 6 | {meteorology-dev} |
hdf-eos5 | 6 | {meteorology-dev} |
libccp4 | 6 | {nanoscale-physics-dev} |
@@ -104,13 +104,13 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
form | 5 | {mathematics} |
libcvd | 5 | {imageanalysis-dev} |
libgctp | 5 | {meteorology-dev} |
- liblxi | 5 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 5 | {engineering-dev,dataacquisition-dev} |
libzn-poly | 5 | {mathematics-dev} |
lrcalc | 5 | {mathematics} |
python-aws-xray-sdk | 5 | {dataacquisition-dev} |
ratpoints | 5 | {mathematics-dev} |
urdfdom-headers | 5 | {robotics-dev} |
- debian-science | 4 | {statistics,economics,nanoscale-physics,physics} |
+ debian-science | 4 | {economics,physics,statistics,nanoscale-physics} |
ecbuild | 4 | {meteorology-dev} |
hfst | 4 | {linguistics} |
libcgns | 4 | {engineering-dev} |
@@ -119,7 +119,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
mpi4py-fft | 4 | {mathematics-dev} |
polylib | 4 | {mathematics} |
silo-llnl | 4 | {engineering-dev} |
- spfft | 4 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 4 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
ucto | 4 | {linguistics} |
veccore | 4 | {mathematics-dev} |
vlfeat | 4 | {imageanalysis-dev} |
@@ -131,11 +131,11 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
dxflib | 3 | {engineering-dev} |
frog | 3 | {linguistics} |
gadap | 3 | {meteorology-dev} |
- hpcc | 3 | {distributedcomputing,numericalcomputation} |
+ hpcc | 3 | {numericalcomputation,distributedcomputing} |
openstereogram | 3 | {tools} |
qd | 3 | {mathematics-dev} |
scram | 3 | {engineering} |
- trilinos | 3 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 3 | {physics-dev,engineering-dev,mathematics-dev} |
asl | 2 | {physics-dev} |
clipper | 2 | {nanoscale-physics-dev} |
coda | 2 | {meteorology-dev} |
@@ -149,7 +149,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
gsw | 2 | {meteorology} |
hfst-ospell | 2 | {linguistics} |
libdogleg | 2 | {mathematics-dev} |
- libgtkdatabox | 2 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 2 | {viewing-dev,engineering-dev} |
liborigin2 | 2 | {viewing-dev} |
libtnt | 2 | {mathematics-dev} |
meshsdfilter | 2 | {mathematics-dev} |
@@ -195,7 +195,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
metview | 1 | {meteorology} |
nrn-mod2c | 1 | {biology} |
openctm | 1 | {physics-dev} |
- python-escript | 1 | {numericalcomputation,engineering,simulations} |
+ python-escript | 1 | {simulations,engineering,numericalcomputation} |
ros-collada-urdf | 1 | {robotics} |
ros-ros-environment | 1 | {robotics-dev} |
schroedinger-coordgenlibs | 1 | {nanoscale-physics-dev,chemistry} |
@@ -222,7 +222,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
apriltag | 0 | {robotics-dev} |
atlas-ecmwf | 0 | {meteorology} |
atlas-ecmwf | 0 | {meteorology-dev} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -234,7 +234,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
etsf-io | 0 | {nanoscale-physics-dev} |
fastjet | 0 | {highenergy-physics-dev} |
glpk-java | 0 | {mathematics-dev} |
- hepmc3 | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
irstlm | 0 | {linguistics} |
libfolia | 0 | {linguistics} |
libquantum | 0 | {numericalcomputation} |
@@ -243,7 +243,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
mbtserver | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
opengv | 0 | {geometry} |
@@ -259,7 +259,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
spaghetti | 0 | {geography} |
@@ -276,7 +276,7 @@ Last-Update: Sat, 27 Jun 2026 13:42:05 +0000
visp-images | 0 | {robotics-dev} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
tamuanova | -1 | {statistics} |
(307 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 27 Jun 2026 13:42:06 +0000
+Last-Update: Sun, 28 Jun 2026 01:42:06 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fe360cee56fc5ac225eb721c0320b295f479d224
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/fe360cee56fc5ac225eb721c0320b295f479d224
You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260628/de2ac606/attachment-0001.htm>