[med-svn] [Git][med-team/ivar][master] 6 commits: Fix clean target. Closes: #1047333.

[Santiago Vila (@sanvila)]

Santiago Vila pushed to branch master at Debian Med / ivar


Commits:
30cbf711 by Santiago Vila at 2026-03-02T18:50:00+01:00
Fix clean target. Closes: #1047333.

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8649155b by Santiago Vila at 2026-03-02T18:51:00+01:00
d/control: Drop "Rules-Requires-Root: no" (default).

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25593b8c by Santiago Vila at 2026-03-02T18:52:00+01:00
d/control: Drop "Priority: optional" (default).

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db3a3ac8 by Santiago Vila at 2026-03-02T18:53:00+01:00
d/control: Update standards-version.

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99ad3c75 by Santiago Vila at 2026-03-02T18:54:00+01:00
d/salsa-ci.yml: Use the simplified version.

No need to disable reprotest anymore because it has been replaced by debrebuild, which seems to work.

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7f0c87dd by Santiago Vila at 2026-03-02T18:55:00+01:00
Upload for unstable as 1.4.4+dfsg-2

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4 changed files:

- debian/changelog
- debian/clean
- debian/control
- debian/salsa-ci.yml


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,14 @@
+ivar (1.4.4+dfsg-2) unstable; urgency=medium
+
+  * Team upload.
+  * Fix clean target. Closes: #1047333.
+  * Drop "Rules-Requires-Root: no" (default).
+  * Drop "Priority: optional" (default).
+  * Update standards-version.
+  * Simplify salsa-ci.yml.
+
+ -- Santiago Vila <sanvila at debian.org>  Mon, 02 Mar 2026 18:55:00 +0100
+
 ivar (1.4.4+dfsg-1) unstable; urgency=medium
 
   * New upstream version 1.4.4+dfsg


=====================================
debian/clean
=====================================
@@ -7,9 +7,11 @@ data/test.trimmed.masked.bam
 data/test.trimmed.masked.bam.bai
 data/test.trimmed.sorted.bam.bai
 data/test.unmapped.sorted.bam.bai
+data/test_strand.tsv
 data/trim_isize.bam
-src/ivar
 src/*.o
+src/ivar
+tests/*.o
 tests/check_allele_depth
 tests/check_amplicon_search
 tests/check_common_variants
@@ -21,7 +23,6 @@ tests/check_consensus_threshold
 tests/check_getmasked
 tests/check_interval_tree
 tests/check_isize_trim
-tests/check_isize_trim
 tests/check_primer_bed
 tests/check_primer_trim
 tests/check_primer_trim_edge_cases
@@ -30,4 +31,3 @@ tests/check_removereads
 tests/check_trim
 tests/check_unpaired_trim
 tests/check_variants
-tests/*.o


=====================================
debian/control
=====================================
@@ -3,14 +3,12 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Andreas Tille <tille at debian.org>,
            Étienne Mollier <emollier at debian.org>
 Section: science
-Priority: optional
 Build-Depends: debhelper-compat (= 13),
                libhts-dev
-Standards-Version: 4.7.0
+Standards-Version: 4.7.3
 Vcs-Browser: https://salsa.debian.org/med-team/ivar
 Vcs-Git: https://salsa.debian.org/med-team/ivar.git
 Homepage: https://github.com/andersen-lab/ivar
-Rules-Requires-Root: no
 
 Package: ivar
 Architecture: any


=====================================
debian/salsa-ci.yml
=====================================
@@ -1,7 +1,3 @@
 ---
 include:
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
-  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
-
-reprotest:
-  allow_failure: true
+  - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml



View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/11d807211c0aa6bb2c465f87c55c001480bc7961...7f0c87ddf1fda8183f8d8b8798ba17ecafb15373

-- 
View it on GitLab: https://salsa.debian.org/med-team/ivar/-/compare/11d807211c0aa6bb2c465f87c55c001480bc7961...7f0c87ddf1fda8183f8d8b8798ba17ecafb15373
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