[med-svn] [Git][med-team/ragout][master] add blhc.patch

Alexandre Detiste (@detiste-guest) gitlab at salsa.debian.org
Sat Mar 7 15:37:31 GMT 2026



Alexandre Detiste pushed to branch master at Debian Med / ragout


Commits:
abd12195 by Alexandre Detiste at 2026-03-07T16:37:16+01:00
add blhc.patch

- - - - -


2 changed files:

- + debian/patches/blhc.patch
- debian/patches/series


Changes:

=====================================
debian/patches/blhc.patch
=====================================
@@ -0,0 +1,32 @@
+--- a/ragout/maf2synteny/cpp_impl/Makefile
++++ b/ragout/maf2synteny/cpp_impl/Makefile
+@@ -14,7 +14,7 @@
+ 	${CXX} ${LDFLAGS} ${objects} -o ${OUT_BIN}
+ 
+ %.o: %.cpp *.h
+-	${CXX} -c ${CXXFLAGS} $< -o $@
++	${CXX} ${CPPFLAGS} -c ${CXXFLAGS} $< -o $@
+ 
+ clean:
+ 	rm *.o
+--- a/ragout/overlap/cpp_impl/Makefile
++++ b/ragout/overlap/cpp_impl/Makefile
+@@ -14,7 +14,7 @@
+ 	${CXX} ${LDFLAGS} ${objects} -o ${OUT_BIN}
+ 
+ %.o: %.cpp *.h
+-	${CXX} -c ${CXXFLAGS} $< -o $@
++	${CXX} ${CPPFLAGS} -c ${CXXFLAGS} $< -o $@
+ 
+ clean:
+ 	rm *.o
+--- a/Makefile
++++ b/Makefile
+@@ -29,6 +29,7 @@
+ 
+ export CXX
+ export CXXFLAGS
++export CPPFLAGS
+ export LDFLAGS
+ export BIN_DIR
+ 


=====================================
debian/patches/series
=====================================
@@ -1,2 +1,3 @@
 connected_component_subgraphs.patch
 python3.12.patch
+blhc.patch



View it on GitLab: https://salsa.debian.org/med-team/ragout/-/commit/abd121950ed3b56fafbd07c9f65b3e4bd45ef20f

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View it on GitLab: https://salsa.debian.org/med-team/ragout/-/commit/abd121950ed3b56fafbd07c9f65b3e4bd45ef20f
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