Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
203b269b by Andreas Tille at 2026-05-10T01:42:30+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 09 May 2026 13:42:04 +0000
+Last-Update: Sun, 10 May 2026 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
@@ -9,7 +9,7 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
gnumed-server | 14 | {covid-19,practice} |
jebl2 | 12 | {bio-dev} |
orthanc-gdcm | 12 | {imaging} |
- oscar | 12 | {tools,practice,data} |
+ oscar | 12 | {data,practice,tools} |
pixelmed | 12 | {imaging} |
adun.app | 11 | {bio} |
bart-view | 11 | {imaging} |
@@ -18,46 +18,46 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
ants | 9 | {imaging} |
sight | 9 | {imaging} |
biojava6-live | 8 | {bio-dev} |
- bio-tradis | 8 | {bio,bio-dev} |
- plasmidid | 8 | {bio,covid-19} |
+ bio-tradis | 8 | {bio-dev,bio} |
+ plasmidid | 8 | {covid-19,bio} |
beast-mcmc | 7 | {bio,bio-phylogeny} |
libdivsufsort | 7 | {bio-dev} |
orthanc-mysql | 7 | {imaging} |
orthanc-postgresql | 7 | {imaging} |
- phyutility | 7 | {cloud,bio} |
+ phyutility | 7 | {bio,cloud} |
piler | 7 | {bio} |
rdp-alignment | 7 | {bio} |
saint | 7 | {bio} |
tracetuner | 7 | {bio} |
- dextractor | 6 | {bio,covid-19} |
+ dextractor | 6 | {covid-19,bio} |
embassy-domainatrix | 6 | {cloud,bio} |
embassy-domalign | 6 | {cloud,bio} |
fastml | 6 | {bio} |
kmerresistance | 6 | {bio} |
- proalign | 6 | {bio,bio-phylogeny} |
+ proalign | 6 | {bio-phylogeny,bio} |
pscan-chip | 6 | {bio} |
rambo-k | 6 | {bio} |
rtax | 6 | {bio,cloud} |
sga | 6 | {bio} |
sprai | 6 | {bio} |
surankco | 6 | {bio} |
- thesias | 6 | {covid-19,bio} |
- treeview | 6 | {bio-phylogeny,bio} |
+ thesias | 6 | {bio,covid-19} |
+ treeview | 6 | {bio,bio-phylogeny} |
brig | 5 | {bio} |
- embassy-domsearch | 5 | {cloud,bio} |
+ embassy-domsearch | 5 | {bio,cloud} |
ipig | 5 | {bio} |
lamarc | 5 | {bio} |
libjloda-java | 5 | {bio-dev} |
malt | 5 | {bio} |
megan-ce | 5 | {bio} |
- melting | 5 | {bio,cloud} |
+ melting | 5 | {cloud,bio} |
mhap | 5 | {bio-ngs,bio} |
plasmidseeker | 5 | {bio} |
sibsim4 | 5 | {bio,cloud} |
skesa | 5 | {bio} |
spread-phy | 5 | {bio,bio-phylogeny} |
surpyvor | 5 | {bio} |
- tophat-recondition | 5 | {bio,covid-19} |
+ tophat-recondition | 5 | {covid-19,bio} |
ctffind | 4 | {bio} |
htscodecs | 4 | {covid-19,bio-dev} |
libpal-java | 4 | {bio-dev} |
@@ -77,7 +77,7 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
libseqlib | 2 | {bio-dev} |
acedb | 1 | {bio,cloud} |
cmtk | 1 | {imaging} |
- cufflinks | 1 | {bio,cloud} |
+ cufflinks | 1 | {cloud,bio} |
eegdev | 1 | {imaging-dev} |
emboss-explorer | 1 | {bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
@@ -86,9 +86,9 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
libgenome | 1 | {bio-dev} |
libqes | 1 | {bio-dev} |
papyrus | 1 | {imaging-dev} |
- python-seqcluster | 1 | {covid-19,bio-dev} |
+ python-seqcluster | 1 | {bio-dev,covid-19} |
trace2dbest | 1 | {bio} |
- varscan | 1 | {covid-19,bio} |
+ varscan | 1 | {bio,covid-19} |
bambamc | 0 | {bio-dev} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
@@ -100,7 +100,7 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbioparser-dev | 0 | {bio-dev} |
libbpp-core | 0 | {bio-dev} |
libbpp-phyl | 0 | {bio-dev} |
@@ -111,7 +111,7 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
libbpp-seq-omics | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
libgkarrays | 0 | {bio-dev} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
@@ -125,7 +125,7 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
maxflow | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
orthanc-imagej | 0 | {imaging} |
pbcopper | 0 | {bio-dev} |
@@ -139,10 +139,10 @@ Last-Update: Sat, 09 May 2026 13:42:04 +0000
sight | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
- vienna-rna | 0 | {bio,covid-19} |
+ vienna-rna | 0 | {covid-19,bio} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(167 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 09 May 2026 13:42:05 +0000
+Last-Update: Sun, 10 May 2026 01:42:05 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------
@@ -13,39 +13,39 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
refmac-dictionary | 85 | {highenergy-physics-dev,chemistry} |
mbpoll | 70 | {simulations} |
giac | 59 | {mathematics} |
- guiqwt | 52 | {numericalcomputation,viewing} |
+ guiqwt | 52 | {viewing,numericalcomputation} |
pyzo | 48 | {numericalcomputation} |
setzer | 46 | {typesetting} |
imview | 45 | {viewing} |
muparser | 44 | {mathematics-dev} |
sardana | 38 | {dataacquisition} |
- persalys | 37 | {statistics,mathematics,engineering} |
+ persalys | 37 | {engineering,statistics,mathematics} |
ntl | 35 | {mathematics-dev} |
teem | 35 | {imageanalysis} |
palp | 33 | {mathematics} |
- lxi-tools | 32 | {dataacquisition,engineering} |
- python-escript | 29 | {simulations,numericalcomputation,engineering} |
+ lxi-tools | 32 | {engineering,dataacquisition} |
+ python-escript | 29 | {numericalcomputation,simulations,engineering} |
feedgnuplot | 28 | {viewing} |
arduino-mk | 26 | {robotics} |
colpack | 26 | {numericalcomputation} |
ppl | 26 | {numericalcomputation} |
sketch | 26 | {typesetting} |
adolc | 25 | {numericalcomputation} |
- fftw | 24 | {mathematics-dev,meteorology-dev,physics-dev} |
- flann | 23 | {mathematics-dev,engineering-dev} |
- getdp | 23 | {mathematics,simulations,engineering} |
- persalys | 23 | {mathematics,engineering,statistics} |
+ fftw | 24 | {meteorology-dev,mathematics-dev,physics-dev} |
+ flann | 23 | {engineering-dev,mathematics-dev} |
+ getdp | 23 | {simulations,mathematics,engineering} |
+ persalys | 23 | {statistics,mathematics,engineering} |
psurface | 23 | {numericalcomputation} |
- coinor-symphony | 22 | {logic,mathematics,numericalcomputation} |
- debian-science | 21 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
+ coinor-symphony | 22 | {numericalcomputation,logic,mathematics} |
+ debian-science | 21 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
eccodes | 21 | {meteorology,meteorology-dev} |
flintqs | 21 | {mathematics} |
sat4j | 21 | {logic} |
- toulbar2 | 21 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 21 | {logic,physics,mathematics,numericalcomputation} |
libcvd | 20 | {imageanalysis} |
libm4ri | 20 | {mathematics-dev} |
xygrib | 20 | {meteorology} |
- debian-science | 19 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 19 | {machine-learning,economics,physics,nanoscale-physics} |
eccodes | 19 | {meteorology-dev} |
grads | 19 | {meteorology} |
libmatio | 19 | {mathematics-dev} |
@@ -53,9 +53,9 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
debian-science | 18 | {tools} |
dune-uggrid | 18 | {mathematics-dev} |
ipe-tools | 18 | {typesetting} |
- debian-science | 17 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 17 | {neuroscience-cognitive,machine-learning} |
debian-science | 17 | {electrophysiology} |
- jeuclid | 17 | {viewing,typesetting} |
+ jeuclid | 17 | {typesetting,viewing} |
mseed2sac | 16 | {dataacquisition-dev} |
picosat | 16 | {logic} |
feff85exafs | 15 | {chemistry} |
@@ -64,7 +64,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
python-cdo | 14 | {meteorology} |
ros-vcstool | 14 | {robotics-dev} |
cliquer | 13 | {mathematics} |
- matlab-support | 13 | {mathematics,numericalcomputation} |
+ matlab-support | 13 | {numericalcomputation,mathematics} |
apertium | 12 | {linguistics} |
lttoolbox | 12 | {linguistics} |
urdfdom-headers | 12 | {robotics-dev} |
@@ -77,11 +77,11 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
chemical-structures | 10 | {chemistry} |
cliquer | 10 | {mathematics-dev} |
hfst | 10 | {linguistics} |
- libitpp | 10 | {engineering-dev,mathematics-dev} |
- libvigraimpex | 10 | {imageanalysis-dev,machine-learning} |
+ libitpp | 10 | {mathematics-dev,engineering-dev} |
+ libvigraimpex | 10 | {machine-learning,imageanalysis-dev} |
vdt | 10 | {mathematics-dev} |
cg3 | 9 | {linguistics} |
- fftw | 9 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 9 | {meteorology-dev,mathematics-dev,physics-dev} |
libccp4 | 9 | {nanoscale-physics-dev} |
auto-07p | 8 | {mathematics} |
iml | 8 | {mathematics-dev} |
@@ -102,7 +102,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
vlfeat | 7 | {imageanalysis-dev} |
apertium-apy | 6 | {linguistics} |
cdftools | 6 | {meteorology} |
- debian-science | 6 | {statistics,economics,nanoscale-physics,physics} |
+ debian-science | 6 | {economics,physics,statistics,nanoscale-physics} |
dxsamples | 6 | {nanoscale-physics} |
gf2x | 6 | {mathematics-dev} |
libgctp | 6 | {meteorology-dev} |
@@ -115,7 +115,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
coda | 5 | {meteorology-dev} |
coda | 5 | {meteorology} |
hdf-eos4 | 5 | {meteorology-dev} |
- liblxi | 5 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 5 | {engineering-dev,dataacquisition-dev} |
lrcalc | 5 | {mathematics} |
mpi4py-fft | 5 | {mathematics-dev} |
newmat | 5 | {mathematics-dev} |
@@ -127,7 +127,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
flextra | 4 | {meteorology} |
frog | 4 | {linguistics} |
gsw | 4 | {meteorology} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
+ hpcc | 4 | {numericalcomputation,distributedcomputing} |
iapws | 4 | {meteorology} |
libmatheval | 4 | {mathematics} |
liborigin2 | 4 | {viewing-dev} |
@@ -141,7 +141,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
veccore | 4 | {mathematics-dev} |
apache-opennlp | 3 | {linguistics} |
atlas-ecmwf | 3 | {meteorology} |
- coinmp | 3 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 3 | {numericalcomputation,logic,mathematics-dev} |
coinor-bonmin | 3 | {mathematics} |
cylc-flow | 3 | {meteorology} |
debian-science | 3 | {economics} |
@@ -152,7 +152,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
fckit | 3 | {meteorology} |
fpzip | 3 | {meteorology} |
hfst-ospell | 3 | {linguistics} |
- libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 3 | {viewing-dev,engineering-dev} |
libmatheval | 3 | {mathematics-dev} |
metkit | 3 | {meteorology} |
metview | 3 | {meteorology} |
@@ -183,20 +183,20 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
metkit | 2 | {meteorology-dev} |
ncrystal | 2 | {nanoscale-physics-dev,highenergy-physics-dev} |
silo-llnl | 2 | {engineering-dev} |
- spfft | 2 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 2 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
ssm | 2 | {nanoscale-physics-dev} |
timbl | 2 | {linguistics} |
timblserver | 2 | {linguistics} |
apertium-streamparser | 1 | {linguistics} |
apophenia | 1 | {statistics} |
coda | 1 | {meteorology-dev} |
- code-saturne | 1 | {engineering-dev,mathematics-dev} |
+ code-saturne | 1 | {mathematics-dev,engineering-dev} |
cqrlib | 1 | {mathematics-dev} |
cvector | 1 | {mathematics-dev} |
debian-science | 1 | {neuroscience-cognitive} |
dune-functions | 1 | {mathematics-dev} |
dune-typetree | 1 | {mathematics-dev} |
- hepmc3 | 1 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 1 | {nanoscale-physics-dev,highenergy-physics-dev} |
ipe-tools | 1 | {typesetting} |
libdogleg | 1 | {mathematics-dev} |
meshsdfilter | 1 | {mathematics-dev} |
@@ -204,7 +204,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
nrn-iv | 1 | {biology} |
nrn-mod2c | 1 | {biology} |
opengv | 1 | {geometry} |
- python-escript | 1 | {numericalcomputation,engineering,simulations} |
+ python-escript | 1 | {simulations,engineering,numericalcomputation} |
quadrule | 1 | {mathematics-dev} |
robot-testing-framework | 1 | {robotics-dev} |
ros-collada-urdf | 1 | {robotics} |
@@ -213,7 +213,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
siscone | 1 | {highenergy-physics-dev} |
ssm | 1 | {nanoscale-physics} |
tfdocgen | 1 | {linguistics} |
- trilinos | 1 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 1 | {physics-dev,engineering-dev,mathematics-dev} |
amgcl | 0 | {mathematics-dev} |
apertium-afr-nld | 0 | {linguistics} |
apertium-bel-rus | 0 | {linguistics} |
@@ -233,7 +233,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
apertium-urd-hin | 0 | {linguistics} |
asl | 0 | {physics-dev} |
atlas-ecmwf | 0 | {meteorology-dev} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -254,7 +254,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
looptools | 0 | {highenergy-physics-dev} |
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
metis-edf | 0 | {engineering-dev} |
openctm | 0 | {physics-dev} |
@@ -269,7 +269,7 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
tachyon | 0 | {mathematics} |
@@ -286,6 +286,6 @@ Last-Update: Sat, 09 May 2026 13:42:05 +0000
xppaut | 0 | {neuroscience-modeling} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
(316 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 09 May 2026 13:42:06 +0000
+Last-Update: Sun, 10 May 2026 01:42:06 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/203b269b25fc476910cad8958e2a5e89960ef4b6
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/203b269b25fc476910cad8958e2a5e89960ef4b6
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