Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
61299750 by Andreas Tille at 2026-05-24T01:42:27+00:00
automatic update
- - - - -
4 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
- python-team-tests.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,10 +1,10 @@
-Last-Update: Sat, 23 May 2026 13:42:04 +0000
+Last-Update: Sun, 24 May 2026 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
dicomscope | 32 | {imaging} |
mrtrix3 | 19 | {imaging} |
- oscar | 17 | {tools,practice,data} |
+ oscar | 17 | {data,practice,tools} |
pixelmed | 14 | {imaging} |
gnumed-server | 13 | {covid-19,practice} |
heudiconv | 13 | {imaging} |
@@ -19,27 +19,27 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
sight | 9 | {imaging} |
embassy-domainatrix | 8 | {cloud,bio} |
orthanc-postgresql | 8 | {imaging} |
- phyutility | 8 | {cloud,bio} |
+ phyutility | 8 | {bio,cloud} |
piler | 8 | {bio} |
biojava6-live | 7 | {bio-dev} |
- dextractor | 7 | {bio,covid-19} |
+ dextractor | 7 | {covid-19,bio} |
fastml | 7 | {bio} |
lamarc | 7 | {bio} |
orthanc-mysql | 7 | {imaging} |
- proalign | 7 | {bio,bio-phylogeny} |
+ proalign | 7 | {bio-phylogeny,bio} |
pscan-chip | 7 | {bio} |
saint | 7 | {bio} |
spread-phy | 7 | {bio,bio-phylogeny} |
- thesias | 7 | {covid-19,bio} |
- tophat-recondition | 7 | {bio,covid-19} |
+ thesias | 7 | {bio,covid-19} |
+ tophat-recondition | 7 | {covid-19,bio} |
tracetuner | 7 | {bio} |
- embassy-domsearch | 6 | {cloud,bio} |
+ embassy-domsearch | 6 | {bio,cloud} |
htscodecs | 6 | {covid-19,bio-dev} |
kmerresistance | 6 | {bio} |
libjloda-java | 6 | {bio-dev} |
malt | 6 | {bio} |
megan-ce | 6 | {bio} |
- melting | 6 | {bio,cloud} |
+ melting | 6 | {cloud,bio} |
mhap | 6 | {bio-ngs,bio} |
plasmidseeker | 6 | {bio} |
rambo-k | 6 | {bio} |
@@ -51,9 +51,9 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
soapsnp | 6 | {bio} |
suitename | 6 | {bio} |
surpyvor | 6 | {bio} |
- treeview | 6 | {bio-phylogeny,bio} |
+ treeview | 6 | {bio,bio-phylogeny} |
beast-mcmc | 5 | {bio,bio-phylogeny} |
- bio-tradis | 5 | {bio,bio-dev} |
+ bio-tradis | 5 | {bio-dev,bio} |
ctffind | 5 | {bio} |
embassy-domalign | 5 | {cloud,bio} |
ipig | 5 | {bio} |
@@ -67,7 +67,7 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
librg-utils-perl | 4 | {bio} |
pigx-rnaseq | 4 | {bio,covid-19} |
placnet | 4 | {bio} |
- plasmidid | 4 | {bio,covid-19} |
+ plasmidid | 4 | {covid-19,bio} |
runcircos-gui | 4 | {bio} |
brig | 3 | {bio} |
libbio-mage-utils-perl | 3 | {bio-dev} |
@@ -100,24 +100,24 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
libstatgen | 1 | {bio-dev} |
libvbz-hdf-plugin | 1 | {bio-dev} |
ncbi-vdb | 1 | {bio-dev} |
- varscan | 1 | {covid-19,bio} |
- vienna-rna | 1 | {bio,covid-19} |
+ varscan | 1 | {bio,covid-19} |
+ vienna-rna | 1 | {covid-19,bio} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
blimps | 0 | {bio} |
camp | 0 | {imaging-dev} |
capsule-maven-nextflow | 0 | {bio-dev} |
ctn | 0 | {imaging-dev} |
- cufflinks | 0 | {bio,cloud} |
+ cufflinks | 0 | {cloud,bio} |
elastix | 0 | {imaging} |
emboss-explorer | 0 | {bio} |
fis-gtm | 0 | {his} |
gatk-bwamem | 0 | {bio-dev} |
gatk-fermilite | 0 | {bio-dev} |
- jmodeltest | 0 | {bio,bio-phylogeny} |
+ jmodeltest | 0 | {bio-phylogeny,bio} |
libbioparser-dev | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
@@ -127,11 +127,11 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
maxflow | 0 | {imaging-dev} |
metastudent-data | 0 | {bio} |
metastudent-data-2 | 0 | {bio} |
- milib | 0 | {covid-19,bio-dev} |
+ milib | 0 | {bio-dev,covid-19} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
pbseqlib | 0 | {bio-dev} |
- python-seqcluster | 0 | {covid-19,bio-dev} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
rdp-classifier | 0 | {bio} |
resfinder-db | 0 | {bio} |
@@ -144,6 +144,6 @@ Last-Update: Sat, 23 May 2026 13:42:04 +0000
xxsds-dynamic | 0 | {bio-dev} |
sideretro | -1 | {bio} |
sight | -1 | {imaging-dev} |
- tipp | -1 | {covid-19,bio} |
+ tipp | -1 | {bio,covid-19} |
(168 rows)
=====================================
debian-science-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 23 May 2026 13:42:05 +0000
+Last-Update: Sun, 24 May 2026 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------------------+--------+---------------------------------------------------------------------+--------------------------------------------------------
@@ -13,22 +13,22 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
mbpoll | 84 | {simulations} |
refmac-dictionary | 74 | {highenergy-physics-dev,chemistry} |
giac | 50 | {mathematics} |
- guiqwt | 49 | {numericalcomputation,viewing} |
+ guiqwt | 49 | {viewing,numericalcomputation} |
muparser | 47 | {mathematics-dev} |
pyzo | 42 | {numericalcomputation} |
imview | 37 | {viewing} |
setzer | 37 | {typesetting} |
ntl | 36 | {mathematics-dev} |
sardana | 35 | {dataacquisition} |
- python-escript | 33 | {simulations,numericalcomputation,engineering} |
+ python-escript | 33 | {numericalcomputation,simulations,engineering} |
teem | 33 | {imageanalysis} |
colpack | 29 | {numericalcomputation} |
adolc | 28 | {numericalcomputation} |
- persalys | 27 | {statistics,mathematics,engineering} |
- lxi-tools | 25 | {dataacquisition,engineering} |
+ persalys | 27 | {engineering,statistics,mathematics} |
+ lxi-tools | 25 | {engineering,dataacquisition} |
arduino-mk | 24 | {robotics} |
eccodes | 24 | {meteorology,meteorology-dev} |
- flann | 22 | {mathematics-dev,engineering-dev} |
+ flann | 22 | {engineering-dev,mathematics-dev} |
palp | 22 | {mathematics} |
sketch | 22 | {typesetting} |
feedgnuplot | 21 | {viewing} |
@@ -39,37 +39,37 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
psurface | 19 | {numericalcomputation} |
xygrib | 19 | {meteorology} |
apophenia | 18 | {statistics} |
- fftw | 18 | {mathematics-dev,meteorology-dev,physics-dev} |
+ fftw | 18 | {meteorology-dev,mathematics-dev,physics-dev} |
libcvd | 18 | {imageanalysis} |
libmatio | 18 | {mathematics-dev} |
- coinor-symphony | 17 | {logic,mathematics,numericalcomputation} |
- getdp | 17 | {mathematics,simulations,engineering} |
+ coinor-symphony | 17 | {numericalcomputation,logic,mathematics} |
+ getdp | 17 | {simulations,mathematics,engineering} |
libm4ri | 17 | {mathematics-dev} |
- persalys | 17 | {mathematics,engineering,statistics} |
- debian-science | 16 | {physics,machine-learning,economics,mathematics,nanoscale-physics} |
+ persalys | 17 | {statistics,mathematics,engineering} |
+ debian-science | 16 | {mathematics,physics,machine-learning,nanoscale-physics,economics} |
eccodes | 16 | {meteorology-dev} |
gts | 16 | {viewing-dev} |
- debian-science | 15 | {machine-learning,nanoscale-physics,economics,physics} |
+ debian-science | 15 | {machine-learning,economics,physics,nanoscale-physics} |
debian-science | 14 | {tools} |
ipe-tools | 14 | {typesetting} |
picosat | 14 | {logic} |
debian-science | 13 | {electrophysiology} |
- debian-science | 13 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 13 | {neuroscience-cognitive,machine-learning} |
feff85exafs | 13 | {chemistry} |
flintqs | 13 | {mathematics} |
- toulbar2 | 13 | {mathematics,numericalcomputation,physics,logic} |
+ toulbar2 | 13 | {logic,physics,mathematics,numericalcomputation} |
apertium | 12 | {linguistics} |
- libitpp | 12 | {engineering-dev,mathematics-dev} |
+ libitpp | 12 | {mathematics-dev,engineering-dev} |
ros-vcstool | 12 | {robotics-dev} |
vdt | 12 | {mathematics-dev} |
hfst | 11 | {linguistics} |
- jeuclid | 11 | {viewing,typesetting} |
- matlab-support | 11 | {mathematics,numericalcomputation} |
+ jeuclid | 11 | {typesetting,viewing} |
+ matlab-support | 11 | {numericalcomputation,mathematics} |
metar | 11 | {meteorology} |
mseed2sac | 11 | {dataacquisition-dev} |
pcl | 11 | {robotics-dev} |
alberta | 10 | {engineering-dev} |
- libvigraimpex | 10 | {imageanalysis-dev,machine-learning} |
+ libvigraimpex | 10 | {machine-learning,imageanalysis-dev} |
lttoolbox | 10 | {linguistics} |
opencascade | 10 | {simulations} |
bossa | 9 | {devices} |
@@ -82,7 +82,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
python-cdo | 8 | {meteorology} |
rubiks | 8 | {mathematics,geometry} |
toon | 8 | {numericalcomputation} |
- fftw | 7 | {meteorology-dev,physics-dev,mathematics-dev} |
+ fftw | 7 | {meteorology-dev,mathematics-dev,physics-dev} |
libgctp | 7 | {meteorology-dev} |
libhomfly | 7 | {mathematics-dev} |
ncl | 7 | {meteorology} |
@@ -93,7 +93,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
iml | 6 | {mathematics-dev} |
libccp4 | 6 | {nanoscale-physics-dev} |
libcgns | 6 | {engineering} |
- liblxi | 6 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 6 | {engineering-dev,dataacquisition-dev} |
libxsmm | 6 | {mathematics-dev} |
ncl | 6 | {meteorology-dev} |
rheolef | 6 | {mathematics} |
@@ -114,7 +114,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
form | 4 | {mathematics} |
frog | 4 | {linguistics} |
gf2x | 4 | {mathematics-dev} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
+ hpcc | 4 | {numericalcomputation,distributedcomputing} |
libcgns | 4 | {engineering-dev} |
libm4rie | 4 | {mathematics-dev} |
libmatheval | 4 | {mathematics} |
@@ -128,9 +128,9 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
apertium-apy | 3 | {linguistics} |
atlas-ecmwf | 3 | {meteorology} |
cdftools | 3 | {meteorology} |
- coinmp | 3 | {numericalcomputation,mathematics-dev,logic} |
+ coinmp | 3 | {numericalcomputation,logic,mathematics-dev} |
debian-science | 3 | {economics} |
- debian-science | 3 | {statistics,economics,nanoscale-physics,physics} |
+ debian-science | 3 | {economics,physics,statistics,nanoscale-physics} |
dimbl | 3 | {linguistics} |
drslib | 3 | {meteorology} |
ecbuild | 3 | {meteorology-dev} |
@@ -140,7 +140,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
gsw | 3 | {meteorology} |
hfst-ospell | 3 | {linguistics} |
iapws | 3 | {meteorology} |
- libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
+ libgtkdatabox | 3 | {viewing-dev,engineering-dev} |
libmatheval | 3 | {mathematics-dev} |
libzn-poly | 3 | {mathematics-dev} |
lrcalc | 3 | {mathematics} |
@@ -177,7 +177,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
ratpoints | 2 | {mathematics-dev} |
ros-ros-environment | 2 | {robotics-dev} |
silo-llnl | 2 | {engineering-dev} |
- spfft | 2 | {nanoscale-physics-dev,meteorology-dev,mathematics-dev,physics-dev} |
+ spfft | 2 | {mathematics-dev,nanoscale-physics-dev,meteorology-dev,physics-dev} |
timbl | 2 | {linguistics} |
timblserver | 2 | {linguistics} |
apriltag | 1 | {robotics-dev} |
@@ -208,7 +208,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
ssm | 1 | {nanoscale-physics} |
tfdocgen | 1 | {linguistics} |
triangle | 1 | {physics-dev} |
- trilinos | 1 | {mathematics-dev,physics-dev,engineering-dev} |
+ trilinos | 1 | {physics-dev,engineering-dev,mathematics-dev} |
tulip | 1 | {viewing-dev} |
x13as | 1 | {economics} |
amgcl | 0 | {mathematics-dev} |
@@ -231,11 +231,11 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
apertium-urd-hin | 0 | {linguistics} |
asl | 0 | {physics-dev} |
atlas-ecmwf | 0 | {meteorology-dev} |
- calculix-ccx-test | 0 | {numericalcomputation,engineering,simulations} |
+ calculix-ccx-test | 0 | {numericalcomputation,simulations,engineering} |
cg3 | 0 | {linguistics} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
- code-saturne | 0 | {engineering-dev,mathematics-dev} |
+ code-saturne | 0 | {mathematics-dev,engineering-dev} |
code-saturne | 0 | {engineering} |
debian-science | 0 | {physics} |
dune-grid-glue | 0 | {mathematics-dev} |
@@ -245,14 +245,14 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
fpzip | 0 | {meteorology-dev} |
frogdata | 0 | {linguistics} |
glpk-java | 0 | {mathematics-dev} |
- hepmc3 | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ hepmc3 | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
libfolia | 0 | {linguistics} |
libquantum | 0 | {numericalcomputation} |
libsdsl | 0 | {dataacquisition-dev} |
looptools | 0 | {highenergy-physics-dev} |
magma | 0 | {numericalcomputation,mathematics-dev} |
mbt | 0 | {linguistics} |
- mctc-lib | 0 | {highenergy-physics-dev,nanoscale-physics-dev} |
+ mctc-lib | 0 | {nanoscale-physics-dev,highenergy-physics-dev} |
metis-edf | 0 | {engineering,numericalcomputation} |
metis-edf | 0 | {engineering-dev} |
openctm | 0 | {physics-dev} |
@@ -270,7 +270,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
sagemath-database-elliptic-curves | 0 | {mathematics} |
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
- schroedinger-maeparser | 0 | {chemistry,nanoscale-physics-dev} |
+ schroedinger-maeparser | 0 | {nanoscale-physics-dev,chemistry} |
siscone | 0 | {highenergy-physics-dev} |
slicot | 0 | {engineering-dev,robotics-dev} |
tachyon | 0 | {mathematics} |
@@ -285,7 +285,7 @@ Last-Update: Sat, 23 May 2026 13:42:05 +0000
xppaut | 0 | {neuroscience-modeling} |
libelas | -1 | {robotics-dev} |
psurface | -1 | {numericalcomputation} |
- python-escript | -1 | {numericalcomputation,engineering,simulations} |
- sisl | -1 | {engineering-dev,robotics-dev} |
+ python-escript | -1 | {simulations,engineering,numericalcomputation} |
+ sisl | -1 | {robotics-dev,engineering-dev} |
(316 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
=====================================
python-team-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sat, 23 May 2026 13:42:06 +0000
+Last-Update: Sun, 24 May 2026 01:42:04 +0000
Source | Vote | Tags
----------------------------------------+--------+--------------------------------------------------------
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/61299750d53fe060ded04fce3c03834b01c201b3
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/61299750d53fe060ded04fce3c03834b01c201b3
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