[med-svn] [Git][med-team/aevol][master] 5 commits: Its known that the package does not build on 32 bit architectures but...
Andreas Tille (@tille)
gitlab at salsa.debian.org
Sun May 24 22:46:48 BST 2026
Andreas Tille pushed to branch master at Debian Med / aevol
Commits:
e5302490 by Andreas Tille at 2026-05-24T23:04:12+02:00
Its known that the package does not build on 32 bit architectures but Build-Depends from architecture-is-64-bit to not even try
- - - - -
59c70aa4 by Andreas Tille at 2026-05-24T23:05:55+02:00
Permit failure of blhc on Salsa CI
- - - - -
0a7e6fbc by Andreas Tille at 2026-05-24T23:09:39+02:00
cme fix dpkg-control
- - - - -
ed2d3fed by Andreas Tille at 2026-05-24T23:23:20+02:00
Revert "Remove duplicate values for fields Author, Author, Author, Entry, Entry, Name, Title in debian/upstream/metadata."
This reverts commit e7a9054ff3e1242925f240dbdba4bfa701b76f37.
- - - - -
2c015445 by Andreas Tille at 2026-05-24T23:24:55+02:00
Remove `Rules-Requires-Root: no` which is default now
- - - - -
4 changed files:
- debian/changelog
- debian/control
- debian/salsa-ci.yml
- debian/upstream/metadata
Changes:
=====================================
debian/changelog
=====================================
@@ -2,6 +2,12 @@ aevol (9.3.0-2) UNRELEASED; urgency=medium
* Adapt autopkgtest to new upstream version
Closes: #1131937
+ * Its known that the package does not build on 32 bit architectures
+ but Build-Depends from architecture-is-64-bit to not even try
+ * Permit failure of blhc on Salsa CI
+ * cme fix dpkg-control
+ * Revert change of lintian-brush which broke references in upstream metadata
+ * Remove `Rules-Requires-Root: no` which is default now
-- Andreas Tille <tille at debian.org> Sun, 24 May 2026 22:18:24 +0200
=====================================
debian/control
=====================================
@@ -1,27 +1,30 @@
Source: aevol
+Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: David Parsons <david.parsons at inria.fr>
+Uploaders:
+ David Parsons <david.parsons at inria.fr>,
Section: science
-Build-Depends: debhelper-compat (= 13),
- cmake,
- zlib1g-dev,
- libx11-dev,
- libboost-dev,
- libboost-filesystem-dev,
- mpi-default-dev,
- nlohmann-json3-dev,
- googletest,
- libgtest-dev
-Standards-Version: 4.7.3
+Build-Depends:
+ debhelper-compat (= 13),
+ architecture-is-64-bit,
+ cmake,
+ zlib1g-dev,
+ libx11-dev,
+ libboost-dev,
+ libboost-filesystem-dev,
+ mpi-default-dev,
+ nlohmann-json3-dev,
+ googletest,
+ libgtest-dev,
Vcs-Browser: https://salsa.debian.org/med-team/aevol
Vcs-Git: https://salsa.debian.org/med-team/aevol.git
Homepage: https://www.aevol.fr/
-Rules-Requires-Root: no
Package: aevol
Architecture: any
-Depends: ${shlibs:Depends},
- ${misc:Depends}
+Depends:
+ ${shlibs:Depends},
+ ${misc:Depends},
Description: digital genetics model to run Evolution Experiments in silico
Aevol is a digital genetics model: populations of digital organisms are
subjected to a process of selection and variation, which creates a
=====================================
debian/salsa-ci.yml
=====================================
@@ -1,4 +1,7 @@
---
include:
- - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml
- - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml
+ - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/recipes/debian.yml
+
+# Permit failure of blhc
+blhc:
+ allow_failure: true
=====================================
debian/upstream/metadata
=====================================
@@ -1,28 +1,29 @@
Reference:
-- Author: >
-Dusan Misevic and Antoine Frenoy and David P. Parsons and Francois Taddei:
- Title: Effects of public good properties on the evolution of cooperation
- Booktitle: Proceedings of Artificial Life XIII
- Year: 2012
- Pages: 218-225
- Eprint: http://mitpress.mit.edu/sites/default/files/titles/content/alife13/\
- 978-0-262-31050-5-ch030.pdf
- URL: http://www.aevol.fr/publications/
- Type: inproceedings
-Author: Antoine Frenoy and Francois Taddei and Dusan Misevic
-Title: Robustness and evolvability of cooperation
-Booktitle: Proceedings of Artificial Life XIII
-Year: 2012
-Pages: 53-58
-Eprint: http://mitpress.mit.edu/sites/default/files/titles/content/alife13/\
- 978-0-262-31050-5-ch008.pdf
-URL: http://www.aevol.fr/publications/
-Type: inproceedings
-Guillaume Beslon and David P. Parsons and Yolanda Sanchez-Dehesa:
- and Jose Maria Pena and Carole Knibbe:
- Title: >
- Scaling Laws in Bacterial Genomes: A Side-Effect of Selection of
- Mutational Robustness:
+ - Author: >
+ Dusan Misevic and Antoine Frenoy and David P. Parsons and Francois Taddei
+ Title: "Effects of public good properties on the evolution of cooperation"
+ Booktitle: Proceedings of Artificial Life XIII
+ Year: 2012
+ Pages: 218-225
+ Eprint: "http://mitpress.mit.edu/sites/default/files/titles/content/alife13/\
+ 978-0-262-31050-5-ch030.pdf"
+ URL: http://www.aevol.fr/publications/
+ Type: inproceedings
+ - Author: Antoine Frenoy and Francois Taddei and Dusan Misevic
+ Title: "Robustness and evolvability of cooperation"
+ Booktitle: Proceedings of Artificial Life XIII
+ Year: 2012
+ Pages: 53-58
+ Eprint: "http://mitpress.mit.edu/sites/default/files/titles/content/alife13/\
+ 978-0-262-31050-5-ch008.pdf"
+ URL: http://www.aevol.fr/publications/
+ Type: inproceedings
+ - Author: >
+ Guillaume Beslon and David P. Parsons and Yolanda Sanchez-Dehesa
+ and Jose Maria Pena and Carole Knibbe
+ Title: >
+ Scaling Laws in Bacterial Genomes: A Side-Effect of Selection of
+ Mutational Robustness
Journal: BioSystems
Year: 2010
Volume: 102
@@ -30,27 +31,33 @@ Guillaume Beslon and David P. Parsons and Yolanda Sanchez-Dehesa:
Pages: 32-40
URL: http://www.aevol.fr/publications/
Type: article
-Importance of the rearrangement rates on the organization of transcription:
- Booktitle: Proceedings of Artificial Life XII
- Year: 2010
- Pages: 479-486
- Eprint: >
- http://mitpress.mit.edu/sites/default/files/titles/alife/0262290758chap92.pdf:
- URL: http://www.aevol.fr/publications/
- Type: inproceedings
-Carole Knibbe and Antoine Coulon and Olivier Mazet and Jean-Michel:
- Fayard and Guillaume Beslon:
- Title: A long-term evolutionary pressure on the amount of noncoding DNA
- Journal: Mol. Biol. Evol.
- Year: 2007
- Volume: 24
- Number: 10
- Pages: 2344-2353
- Eprint: http://mbe.oxfordjournals.org/content/
- 24/10/2344.full.pdf+html?sid=9a6ee107-7aed-4750-8015-f8a2cc136cf9
- URL: http://www.aevol.fr/publications/
- Type: article
+ - Author: David P. Parsons and Carole Knibbe and Guillaume Beslon
+ Title: >
+ Importance of the rearrangement rates on the organization of transcription
+ Booktitle: Proceedings of Artificial Life XII
+ Year: 2010
+ Pages: 479-486
+ Eprint: >
+ http://mitpress.mit.edu/sites/default/files/titles/alife/0262290758chap92.pdf
+ URL: http://www.aevol.fr/publications/
+ Type: inproceedings
+ - Author: >
+ Carole Knibbe and Antoine Coulon and Olivier Mazet and Jean-Michel
+ Fayard and Guillaume Beslon
+ Title: "A long-term evolutionary pressure on the amount of noncoding DNA"
+ Journal: Mol. Biol. Evol.
+ Year: 2007
+ Volume: 24
+ Number: 10
+ Pages: 2344-2353
+ Eprint: "http://mbe.oxfordjournals.org/content/
+ 24/10/2344.full.pdf+html?sid=9a6ee107-7aed-4750-8015-f8a2cc136cf9"
+ URL: http://www.aevol.fr/publications/
+ Type: article
Registry:
-- Name: SciCrunch
-Entry: NA
-Name: bio.tools
+ - Name: SciCrunch
+ Entry: NA
+ - Name: bio.tools
+ Entry: NA
+ - Name: OMICtools
+ Entry: OMICS_19719
View it on GitLab: https://salsa.debian.org/med-team/aevol/-/compare/fd72f5b7a305a5f844128c6f97e492876848ad94...2c015445281a866e58d394e7510fc965ea109583
--
View it on GitLab: https://salsa.debian.org/med-team/aevol/-/compare/fd72f5b7a305a5f844128c6f97e492876848ad94...2c015445281a866e58d394e7510fc965ea109583
You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260524/ec318a96/attachment-0001.htm>
More information about the debian-med-commit
mailing list