[med-svn] [Git][med-team/sift][master] 6 commits: Use Debian packaged libblimps

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / sift


Commits:
434ec40e by Andreas Tille at 2026-10-20T10:50:17+02:00
Use Debian packaged libblimps

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c7d738b1 by Andreas Tille at 2026-10-20T10:50:20+02:00
New upstream version 6.2.1+ds
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10828261 by Andreas Tille at 2026-10-20T10:50:21+02:00
Update upstream source from tag 'upstream/6.2.1+ds'

Update to upstream version '6.2.1+ds'
with Debian dir 241417225e30b116fe8bb5db2322cc33c7c68860
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c62e41c9 by Andreas Tille at 2026-10-20T11:00:31+02:00
cme fix dpkg-control

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3512b5e7 by Andreas Tille at 2026-10-20T11:03:43+02:00
Do not install blimps docs

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4137a577 by Andreas Tille at 2026-10-20T11:08:04+02:00
Cleanup docs

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128 changed files:

- − blimps/LAMA.h
- − blimps/Makefile
- − blimps/Makefile.am
- − blimps/Makefile.in
- − blimps/aabet.h
- − blimps/alphabet.h
- − blimps/blastapp.h
- − blimps/blimps-mem.c
- − blimps/blimps-mem.h
- − blimps/blimps.c
- − blimps/blimps.h
- − blimps/blkvblk.h
- − blimps/blockmap.h
- − blimps/blocks.c
- − blimps/blocks.h
- − blimps/blocksprogs.h
- − blimps/codehop.h
- − blimps/config.c
- − blimps/config.h
- − blimps/convert.c
- − blimps/convert.h
- − blimps/docs/Makefile.am
- − blimps/docs/Makefile.in
- − blimps/docs/blosum62.bla.new
- − blimps/docs/coduse.csh
- − blimps/docs/config.doc
- − blimps/docs/default.amino.frq
- − blimps/docs/default.codon.frq
- − blimps/docs/default.codon.use
- − blimps/docs/default.consensus.iij
- − blimps/docs/default.diri
- − blimps/docs/default.embed.iij
- − blimps/docs/default.embed.mat
- − blimps/docs/default.embed.qij
- − blimps/docs/default.iij
- − blimps/docs/default.mat
- − blimps/docs/default.qij
- − blimps/docs/default.rank
- − blimps/docs/default.sij
- − blimps/docs/identity.frq
- − blimps/docs/skiplist.doc
- − blimps/docs/sl-functions.doc
- − blimps/errors.c
- − blimps/errors.h
- − blimps/files.c
- − blimps/files.h
- − blimps/frequency.c
- − blimps/frequency.h
- − blimps/gcode.c
- − blimps/gcode.h
- − blimps/global.h
- − blimps/include/aabet.h
- − blimps/include/alphabet.h
- − blimps/include/blastapp.h
- − blimps/include/blocks.h
- − blimps/include/blocksprogs.h
- − blimps/include/convert.h
- − blimps/include/errors.h
- − blimps/include/files.h
- − blimps/include/frequency.h
- − blimps/include/gcode.h
- − blimps/include/global.h
- − blimps/include/license.h
- − blimps/include/matrix.h
- − blimps/include/memory.h
- − blimps/include/ntbet.h
- − blimps/include/output.h
- − blimps/include/pattern.h
- − blimps/include/protomat.h
- − blimps/include/residues.h
- − blimps/include/sequences.h
- − blimps/include/strutil.h
- − blimps/license.h
- − blimps/lists.c
- − blimps/lists.h
- − blimps/matrix.c
- − blimps/matrix.h
- − blimps/memory.c
- − blimps/memory.h
- − blimps/ntbet.h
- − blimps/obj/blimps-mem.d
- − blimps/obj/blocks.d
- − blimps/obj/config.d
- − blimps/obj/convert.d
- − blimps/obj/errors.d
- − blimps/obj/files.d
- − blimps/obj/frequency.d
- − blimps/obj/gcode.d
- − blimps/obj/lists.d
- − blimps/obj/matrix.d
- − blimps/obj/memory.d
- − blimps/obj/options.d
- − blimps/obj/pattern.d
- − blimps/obj/protomat.d
- − blimps/obj/scores.d
- − blimps/obj/scoring.d
- − blimps/obj/sequences.d
- − blimps/obj/sl.d
- − blimps/obj/strutil.d
- − blimps/obj/version.d
- − blimps/options.c
- − blimps/options.h
- − blimps/output.h
- − blimps/p2c.h
- − blimps/pattern.c
- − blimps/pattern.h
- − blimps/protomat.c
- − blimps/protomat.h
- − blimps/residues.h
- − blimps/scores.c
- − blimps/scores.h
- − blimps/scoring.c
- − blimps/scoring.h
- − blimps/sequences.c
- − blimps/sequences.h
- − blimps/skiplist.h
- − blimps/sl.c
- − blimps/strutil.c
- − blimps/strutil.h
- − blimps/tree.h
- − blimps/version.c
- − blimps/version.h
- debian/changelog
- debian/control
- debian/copyright
- − debian/dirs
- debian/docs
- debian/rules


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/sift/-/compare/341493b054757efb682718c9f9f8c43c0e483e61...4137a577a7d678b63f82fba4e43c3bc98992a7a7

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View it on GitLab: https://salsa.debian.org/med-team/sift/-/compare/341493b054757efb682718c9f9f8c43c0e483e61...4137a577a7d678b63f82fba4e43c3bc98992a7a7
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