[med-svn] [Git][med-team/busco][upstream] New upstream version 6.1.0

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / busco


Commits:
ad6b2c2b by Andreas Tille at 2026-10-21T11:49:51+02:00
New upstream version 6.1.0
- - - - -


46 changed files:

- CHANGELOG
- config/config.ini
- src/busco/Actions.py
- src/busco/AutoLineage.py
- src/busco/BuscoConfig.py
- src/busco/BuscoDownloadManager.py
- src/busco/BuscoLogger.py
- src/busco/BuscoPlacer.py
- src/busco/BuscoPlot.py
- src/busco/BuscoRunner.py
- src/busco/ConfigManager.py
- src/busco/Exceptions.py
- src/busco/__init__.py
- src/busco/_version.py
- src/busco/analysis/Analysis.py
- src/busco/analysis/BuscoAnalysis.py
- src/busco/analysis/GeneSetAnalysis.py
- src/busco/analysis/GenomeAnalysis.py
- src/busco/analysis/TranscriptomeAnalysis.py
- src/busco/analysis/__init__.py
- src/busco/busco_tools/Toolset.py
- src/busco/busco_tools/__init__.py
- src/busco/busco_tools/augustus.py
- src/busco/busco_tools/base.py
- src/busco/busco_tools/bbtools.py
- src/busco/busco_tools/blast.py
- src/busco/busco_tools/hmmer.py
- src/busco/busco_tools/metaeuk.py
- src/busco/busco_tools/miniprot.py
- src/busco/busco_tools/prodigal.py
- src/busco/busco_tools/sepp.py
- src/busco/run_BUSCO.py
- test_data/bacteria/expected_log.txt
- test_data/eukaryota/expected_log.txt
- tests/unittest_runner.py
- tests/unittests/AutoLineage_unittests.py
- + tests/unittests/BuscoAnalysis_unittests.py
- tests/unittests/BuscoConfig_unittests.py
- + tests/unittests/BuscoRunner_analysis_unittests.py
- tests/unittests/ConfigManager_unittests.py
- tests/unittests/GenomeAnalysis_unittests.py
- + tests/unittests/all_modules_unittests.py
- + tests/unittests/augustus_unittests.py
- + tests/unittests/base_unittests.py
- + tests/unittests/hmmer_unittests.py
- + tests/unittests/module_validation_unittests.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/busco/-/commit/ad6b2c2b3ce11478b789580675c758c4355a08c5

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View it on GitLab: https://salsa.debian.org/med-team/busco/-/commit/ad6b2c2b3ce11478b789580675c758c4355a08c5
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