[med-svn] [Git][med-team/gfapy][master] 10 commits: d/watch: version=5

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / gfapy


Commits:
42348bb1 by Andreas Tille at 2026-10-21T15:45:12+02:00
d/watch: version=5

- - - - -
406a6329 by Andreas Tille at 2026-10-21T15:45:50+02:00
Standards-Version: 4.7.4 (routine-update)

- - - - -
2c223d8e by Andreas Tille at 2026-10-21T15:47:46+02:00
Changes made by cme

- - - - -
fa321502 by Andreas Tille at 2026-10-21T15:47:48+02:00
Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)

- - - - -
27bc65c8 by Andreas Tille at 2026-10-21T15:47:48+02:00
Drop 'Rules-Requires-Root: no' from d/control (routine-update)

- - - - -
c6348f52 by Andreas Tille at 2026-10-21T14:47:54+01:00
Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush

- - - - -
6ec1f3dc by Andreas Tille at 2026-10-21T15:47:57+02:00
debputy lint --auto-fix (routine-update)

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1f19408b by Andreas Tille at 2026-10-21T15:53:29+02:00
Remove tests from installation dir Closes: #1151474

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b2a3f6a2 by Andreas Tille at 2026-10-21T16:03:45+02:00
Remove unneeded lintian-overrides

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d58b0fbe by Andreas Tille at 2026-10-21T16:05:12+02:00
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- − debian/lintian-overrides
- debian/rules
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,21 @@
+gfapy (1.2.3+dfsg-4) unstable; urgency=medium
+
+  * Team upload.
+  * d/watch: version=5
+  * Standards-Version: 4.7.4 (routine-update)
+  * Reflow Uploaders field (cme)
+  * Remove Priority field (cme)
+  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
+  * Drop 'Rules-Requires-Root: no' from d/control (routine-update)
+  * Remove obsolete field Name from debian/upstream/metadata (already present in
+    machine-readable debian/copyright).
+  * debputy lint --auto-fix (routine-update)
+  * Remove tests from installation dir
+    Closes: #1151474
+  * Remove unneeded lintian-overrides
+
+ -- Andreas Tille <tille at debian.org>  Wed, 21 Oct 2026 16:03:52 +0200
+
 gfapy (1.2.3+dfsg-3) unstable; urgency=medium
 
   * Add patch to use raw strings where regexes are included.


=====================================
debian/control
=====================================
@@ -1,17 +1,17 @@
 Source: gfapy
+Standards-Version: 4.7.4
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Sascha Steinbiss <satta at debian.org>
+Uploaders:
+ Sascha Steinbiss <satta at debian.org>,
 Section: science
-Priority: optional
-Build-Depends: debhelper-compat (= 13),
-               dh-python,
-               python3,
-               python3-dev,
-               python3-setuptools,
-               python3-pytest,
-               txt2man
-Standards-Version: 4.7.0
-Rules-Requires-Root: no
+Build-Depends:
+ debhelper-compat (= 14),
+ dh-sequence-python3,
+ python3,
+ python3-dev,
+ python3-pytest,
+ python3-setuptools,
+ txt2man,
 Vcs-Browser: https://salsa.debian.org/med-team/gfapy
 Vcs-Git: https://salsa.debian.org/med-team/gfapy.git
 Homepage: https://github.com/ggonnella/gfapy
@@ -19,9 +19,10 @@ Homepage: https://github.com/ggonnella/gfapy
 Package: python3-gfapy
 Architecture: any
 Section: python
-Depends: ${misc:Depends},
-         ${python3:Depends},
-         ${shlibs:Depends}
+Depends:
+ ${misc:Depends},
+ ${python3:Depends},
+ ${shlibs:Depends},
 Description: flexible and extensible software library for handling sequence graphs
  The Graphical Fragment Assembly (GFA) are formats for the representation of
  sequence graphs, including assembly, variation and splicing graphs. Two


=====================================
debian/lintian-overrides deleted
=====================================
@@ -1,2 +0,0 @@
-# this package is primarily a library
-python3-gfapy: library-package-name-for-application *


=====================================
debian/rules
=====================================
@@ -2,6 +2,7 @@
 
 export DEB_BUILD_MAINT_OPTIONS = hardening=+bindnow
 export PYBUILD_NAME=gfapy
+export PYBUILD_AFTER_INSTALL=rm -rf '{destdir}/{install_dir}/tests'
 
 include /usr/share/dpkg/default.mk
 
@@ -21,7 +22,7 @@ MANPAGES=debian/man/gfapy-convert.1 \
 	  	  $< > $@
 
 %:
-	dh $@ --with python3 --buildsystem=pybuild
+	dh $@ --buildsystem=pybuild
 
 override_dh_auto_clean:
 	rm -rf debian/man/*.1


=====================================
debian/upstream/metadata
=====================================
@@ -4,7 +4,6 @@ Cite-As: >
  GfaPy: a flexible and extensible software library for handling sequence
  graphs in Python.
 Contact: gonnella at zbh.uni-hamburg.de
-Name: GfaPy
 Reference:
  - Author: Giorgio Gonnella and Stefan Kurtz
    DOI: 10.1093/bioinformatics/btx398


=====================================
debian/watch
=====================================
@@ -1,4 +1,6 @@
-version=4
-opts=repacksuffix=+dfsg,dversionmangle=s/\+(debian|dfsg|ds|deb)(\.\d+)?$//,repack,compression=xz \
-https://github.com/ggonnella/gfapy/tags .*/(\d[\d.-]+)\.zip
+Version: 5
 
+Template: Github
+Dist: https://github.com/ggonnella/gfapy
+Dversion-Mangle: auto
+Repack-Suffix: +dfsg



View it on GitLab: https://salsa.debian.org/med-team/gfapy/-/compare/90605162a6a65ce452f18ea3dfe8187ffe0d9f6a...d58b0fbe6b6090ad8a852dd8ff1ee7d00503231b

-- 
View it on GitLab: https://salsa.debian.org/med-team/gfapy/-/compare/90605162a6a65ce452f18ea3dfe8187ffe0d9f6a...d58b0fbe6b6090ad8a852dd8ff1ee7d00503231b
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