[med-svn] [Git][med-team/gbwt][upstream] New upstream version 1.6

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / gbwt


Commits:
d71dfe9d by Andreas Tille at 2026-10-21T17:25:55+02:00
New upstream version 1.6
- - - - -


48 changed files:

- .gitignore
- + .gitmodules
- LICENSE
- Makefile
- README.md
- + SERIALIZATION.md
- + VERSION2.md
- include/gbwt/algorithms.h
- include/gbwt/bwtmerge.h
- + include/gbwt/cached_gbwt.h
- include/gbwt/dynamic_gbwt.h
- + include/gbwt/fast_locate.h
- include/gbwt/files.h
- include/gbwt/gbwt.h
- include/gbwt/internal.h
- + include/gbwt/metadata.h
- include/gbwt/support.h
- + include/gbwt/test.h
- include/gbwt/utils.h
- include/gbwt/variants.h
- + install.sh
- algorithms.cpp → src/algorithms.cpp
- benchmark.cpp → src/benchmark.cpp
- build_gbwt.cpp → src/build_gbwt.cpp
- + src/build_ri.cpp
- bwtmerge.cpp → src/bwtmerge.cpp
- + src/cached_gbwt.cpp
- dynamic_gbwt.cpp → src/dynamic_gbwt.cpp
- + src/fast_locate.cpp
- files.cpp → src/files.cpp
- gbwt.cpp → src/gbwt.cpp
- internal.cpp → src/internal.cpp
- merge_gbwt.cpp → src/merge_gbwt.cpp
- + src/metadata.cpp
- metadata.cpp → src/metadata_tool.cpp
- + src/remove_seq.cpp
- support.cpp → src/support.cpp
- prepare_text.cpp → src/test.cpp
- utils.cpp → src/utils.cpp
- variants.cpp → src/variants.cpp
- tests/Makefile
- tests/test_bwtmerge.cpp
- + tests/test_gbwt.cpp
- + tests/test_metadata.cpp
- + tests/test_queries.cpp
- + tests/test_support.cpp
- + tests/test_utils.cpp
- tests/test_variants.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/gbwt/-/commit/d71dfe9d48fc436a2f44b726538a08220ead58f2

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View it on GitLab: https://salsa.debian.org/med-team/gbwt/-/commit/d71dfe9d48fc436a2f44b726538a08220ead58f2
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