[med-svn] [Git][med-team/blimps][master] 10 commits: This was never released

Andreas Tille (@tille) gitlab at salsa.debian.org
Fri Oct 23 12:54:29 BST 2026 


Andreas Tille pushed to branch master at Debian Med / blimps


Commits:
b1b1d10c by Andreas Tille at 2026-10-23T13:49:21+02:00
This was never released

- - - - -
8c61344e by Andreas Tille at 2026-10-23T13:50:19+02:00
d/watch: version=5

- - - - -
27b9fe4a by Andreas Tille at 2026-10-23T13:50:27+02:00
Standards-Version: 4.7.4 (routine-update)

- - - - -
7563bc9b by Andreas Tille at 2026-10-23T13:50:27+02:00
debhelper-compat 13 (routine-update)

- - - - -
ef1fa059 by Andreas Tille at 2026-10-23T13:50:38+02:00
Changes made by cme

- - - - -
090dd160 by Andreas Tille at 2026-10-23T12:50:42+01:00
Reformat the Last-Update date as ISO YYYY-MM-DD.

Changes-By: lintian-brush
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/gets.patch]
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/makefile.patch]
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/hardening.patch]
Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/avoid_privacy_breach.patch]
See-also: https://lintian.debian.org/tags/invalid-dep3-format-patch-wrong-last-update.html

- - - - -
855b217a by Andreas Tille at 2026-10-23T12:50:43+01:00
Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright).

Changes-By: lintian-brush

- - - - -
a8e1e399 by Andreas Tille at 2026-10-23T12:50:43+01:00
Remove unnecessary Team Upload line in changelog.

Changes-By: lintian-brush
Fixes: lintian: source: unnecessary-team-upload [debian/changelog:1]
See-also: https://lintian.debian.org/tags/unnecessary-team-upload.html

- - - - -
ce7a6bd9 by Andreas Tille at 2026-10-23T13:50:49+02:00
debputy lint --auto-fix (routine-update)

- - - - -
440315b7 by Andreas Tille at 2026-10-23T13:51:49+02:00
routine-update: Ready to upload to unstable

- - - - -


9 changed files:

- debian/changelog
- − debian/compat
- debian/control
- debian/patches/avoid_privacy_breach.patch
- debian/patches/gets.patch
- debian/patches/hardening.patch
- debian/patches/makefile.patch
- debian/upstream/metadata
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,6 +1,5 @@
 blimps (3.9+ds-5) unstable; urgency=medium
 
-  * Team upload.
   * d/rules: build with -std=gnu17 to cope with gcc-15's default of C23
     mode, which the K&R code does not support. (Closes: #1114069)
   * protomat-honour-build-flags.patch: new: make the protomat tools build
@@ -14,8 +13,17 @@ blimps (3.9+ds-5) unstable; urgency=medium
   * p2clib-time_t.patch: new: use time_t for the result of time() in
     TimeStamp(), VAXdate() and VAXtime(), which is the wrong type (long) on
     32-bit architectures with 64-bit time_t.
-
- -- Andreas Tille <tille at debian.org>  Sat, 17 Oct 2026 21:30:00 +0200
+  * d/watch: version=5
+  * Standards-Version: 4.7.4 (routine-update)
+  * debhelper-compat 13 (routine-update)
+  * Reflow Uploaders field (cme)
+  * Remove Priority field (cme)
+  * Reformat the Last-Update date as ISO YYYY-MM-DD.
+  * Remove obsolete field Name from debian/upstream/metadata (already present in
+    machine-readable debian/copyright).
+  * debputy lint --auto-fix (routine-update)
+
+ -- Andreas Tille <tille at debian.org>  Fri, 23 Oct 2026 13:50:51 +0200
 
 blimps (3.9+ds-4) unstable; urgency=medium
 


=====================================
debian/compat deleted
=====================================
@@ -1 +0,0 @@
-12


=====================================
debian/control
=====================================
@@ -1,22 +1,24 @@
 Source: blimps
+Standards-Version: 4.7.4
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Laszlo Kajan <lkajan at rostlab.org>,
-           Andreas Tille <tille at debian.org>
+Uploaders:
+ Laszlo Kajan <lkajan at rostlab.org>,
+ Andreas Tille <tille at debian.org>,
 Section: non-free/science
 XS-Autobuild: yes
-Priority: optional
-Build-Depends: debhelper (>= 12~),
-               d-shlibs (>= 0.84~)
-Standards-Version: 4.7.0
+Build-Depends:
+ debhelper-compat (= 14),
+ d-shlibs,
 Vcs-Browser: https://salsa.debian.org/med-team/blimps
 Vcs-Git: https://salsa.debian.org/med-team/blimps.git
 Homepage: https://web.archive.org/web/20170606235903/http://blocks.fhcrc.org/blocks/uploads/blimps/
 
 Package: blimps-utils
 Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         libblimps3
+Depends:
+ libblimps3,
+ ${misc:Depends},
+ ${shlibs:Depends},
 Description: blocks database improved searcher
  BLIMPS (BLocks IMProved Searcher) is a searching tool that scores
  a protein sequence against blocks or a block against sequences.
@@ -25,11 +27,14 @@ Description: blocks database improved searcher
 
 Package: blimps-examples
 Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Recommends: tcsh | csh
-Enhances: libblimps3-dev,
-          blimps-utils
+Depends:
+ ${misc:Depends},
+ ${shlibs:Depends},
+Recommends:
+ tcsh | csh,
+Enhances:
+ libblimps3-dev,
+ blimps-utils,
 Description: blocks database improved searcher (example data)
  BLIMPS (BLocks IMProved Searcher) is a searching tool that scores
  a protein sequence against blocks or a block against sequences.
@@ -39,11 +44,15 @@ Description: blocks database improved searcher (example data)
 Package: libblimps3-dev
 Architecture: any
 Section: non-free/libdevel
-Depends: ${misc:Depends},
-         libblimps3 (= ${binary:Version})
-Suggests: blimps-utils
-Provides: libblimps-dev
-Conflicts: libblimps-dev
+Depends:
+ libblimps3 (= ${binary:Version}),
+ ${misc:Depends},
+Suggests:
+ blimps-utils,
+Conflicts:
+ libblimps-dev,
+Provides:
+ libblimps-dev,
 Description: blocks database improved searcher library (development)
  BLIMPS (BLocks IMProved Searcher) is a searching tool that scores
  a protein sequence against blocks or a block against sequences.
@@ -53,9 +62,11 @@ Description: blocks database improved searcher library (development)
 Package: libblimps3
 Architecture: any
 Section: non-free/libs
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Suggests: blimps-utils
+Depends:
+ ${misc:Depends},
+ ${shlibs:Depends},
+Suggests:
+ blimps-utils,
 Description: blocks database improved searcher library
  BLIMPS (BLocks IMProved Searcher) is a searching tool that scores
  a protein sequence against blocks or a block against sequences.


=====================================
debian/patches/avoid_privacy_breach.patch
=====================================
@@ -1,7 +1,7 @@
 Description: Avoid privacy breach by linking to external gif
  The gif in question does not exist any more anyway
 Author: Andreas Tille <tille at debian.org>
-Last-Update: Thu, 10 Jan 2019 22:19:40 +0100
+Last-Update: 2019-01-10
 
 --- a/www/thanks.html
 +++ b/www/thanks.html


=====================================
debian/patches/gets.patch
=====================================
@@ -1,5 +1,5 @@
 Author: Laszlo Kajan
-Last-Update: 2012-01-31 17:21:48 +0000
+Last-Update: 2012-01-31
 Description: replaced gets() with fgets()
 Remark: There is a patch at
    https://web.archive.org/web/20170703191319/http://blocks.fhcrc.org/blocks/uploads/blimps/blimps.patch.txt


=====================================
debian/patches/hardening.patch
=====================================
@@ -1,6 +1,6 @@
 Description: Propagate hardening options
 Author: Andreas Tille <tille at debian.org>
-Last-Update: Thu, 10 Jan 2019 22:19:40 +0100
+Last-Update: 2019-01-10
 
 --- a/Makefile
 +++ b/Makefile


=====================================
debian/patches/makefile.patch
=====================================
@@ -1,5 +1,5 @@
 Author: Laszlo Kajan
-Last-Update: 2012-01-31 17:21:48 +0000
+Last-Update: 2012-01-31
 Description: fixes to blimps/Makefile.Linux
 
 --- a/blimps/Makefile.Linux


=====================================
debian/upstream/metadata
=====================================
@@ -1,4 +1,3 @@
-Name: blimps
 Contact: Jorja Henikoff <jorja at fhcrc.org>
 Reference:
  Author: J. G. Henikoff and S. Pietrokovski and C. M. McCallum and S. Henikoff


=====================================
debian/watch
=====================================
@@ -1,4 +1,6 @@
-version=4
+Version: 5
 
-opts="pasv,repacksuffix=+ds,dversionmangle=auto,repack,compression=xz" \
- ftp://ftp.ncbi.nih.gov/repository/blocks/unix/blimps/blimps-([0-9.]+)\.tar\.gz
+Source: ftp://ftp.ncbi.nih.gov/repository/blocks/unix/blimps/
+Matching-Pattern: blimps-([0-9.]+)\.tar\.gz
+Dversion-Mangle: auto
+Repack-Suffix: +ds



View it on GitLab: https://salsa.debian.org/med-team/blimps/-/compare/ae3caf09838b4c93ef7c45c0effa0ec8354d7c69...440315b7ad28c3916c5ab954ca8e83996360f6ca

-- 
View it on GitLab: https://salsa.debian.org/med-team/blimps/-/compare/ae3caf09838b4c93ef7c45c0effa0ec8354d7c69...440315b7ad28c3916c5ab954ca8e83996360f6ca
You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20261023/7b2dded6/attachment-0001.htm>

More information about the debian-med-commit mailing list