[med-svn] [Git][med-team/librostlab][master] 6 commits: Drop obsolete jquery linktree

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / librostlab


Commits:
3bacd9c3 by Andreas Tille at 2026-10-24T07:56:01+02:00
Drop obsolete jquery linktree

Recent doxygen versions no longer generate html/jquery.js, so
dh_linktree called dpkg --search without any argument and the
package failed to build.

Closes: #1151817

- - - - -
96b7033c by Andreas Tille at 2026-10-24T08:07:55+02:00
d/watch: version=5, unavailable

- - - - -
fb3521a0 by Andreas Tille at 2026-10-24T08:08:15+02:00
Standards-Version: 4.7.4 (routine-update)

- - - - -
f77c8946 by Andreas Tille at 2026-10-24T07:18:22+01:00
Remove redundant Priority: optional from source stanza.

Changes-By: lintian-brush
Fixes: lintian: source: redundant-priority-optional-field
See-also: https://lintian.debian.org/tags/redundant-priority-optional-field.html

- - - - -
58fb0531 by Andreas Tille at 2026-10-24T08:33:55+02:00
Remove Rules-Requires-Root: no

- - - - -
10d279d9 by Andreas Tille at 2026-10-24T09:16:28+02:00
Lintian-overrides for no-code-sections

- - - - -


6 changed files:

- debian/changelog
- debian/control
- − debian/librostlab-doc.linktrees
- + debian/librostlab3-dev.lintian-overrides
- debian/rules
- debian/watch


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,17 @@
+librostlab (1.0.20-15) UNRELEASED; urgency=medium
+
+  * Drop obsolete jquery linktree.  Recent doxygen versions no longer
+    generate html/jquery.js, so dh_linktree ended up calling dpkg --search
+    without arguments and the package failed to build.
+    Closes: #1151817
+  * d/watch: version=5, unavailable
+  * Standards-Version: 4.7.4 (routine-update)
+  * Remove redundant Priority: optional from source stanza.
+  * Remove Rules-Requires-Root: no
+  * Lintian-overrides for no-code-sections
+
+ -- Andreas Tille <tille at debian.org>  Sat, 24 Oct 2026 06:45:09 +0200
+
 librostlab (1.0.20-14) unstable; urgency=medium
 
   * Fix clean target


=====================================
debian/control
=====================================
@@ -3,23 +3,18 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.
 Uploaders: Laszlo Kajan <lkajan at rostlab.org>,
            Andreas Tille <tille at debian.org>
 Section: science
-Priority: optional
 Build-Depends: debhelper-compat (= 13),
-               dh-linktree,
 Build-Depends-Arch: dpkg-dev (>= 1.22.5), d-shlibs (>= 0.106~)
 Build-Depends-Indep: doxygen,
                      graphviz,
                      texlive-latex-recommended,
                      texlive-fonts-recommended,
                      texlive-latex-extra,
-                     texlive-plain-generic,
-                     sphinx-common,
-                     python3-sphinxcontrib.jquery
-Standards-Version: 4.7.0
+                     texlive-plain-generic
+Standards-Version: 4.7.4
 Vcs-Browser: https://salsa.debian.org/med-team/librostlab
 Vcs-Git: https://salsa.debian.org/med-team/librostlab.git
 Homepage: https://rostlab.org/
-Rules-Requires-Root: no
 
 Package: librostlab3t64
 Provides: ${t64:Provides}
@@ -78,8 +73,7 @@ Package: librostlab-doc
 Architecture: all
 Section: doc
 Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         ${js:Depends}
+         ${misc:Depends}
 Multi-Arch: foreign
 Description: C++ library for computational biology (documentation)
  This library was developed by the Rost Lab.  The lab's research is


=====================================
debian/librostlab-doc.linktrees deleted
=====================================
@@ -1 +0,0 @@
-replace	usr/lib/python3/dist-packages/sphinxcontrib/jquery/jquery.js	usr/share/doc/librostlab-doc/html/jquery.js


=====================================
debian/librostlab3-dev.lintian-overrides
=====================================
@@ -0,0 +1,3 @@
+# False popsitive since library has only data sections
+librostlab3-dev: no-code-sections [usr/lib/x86_64-linux-gnu/librostlab.a]
+


=====================================
debian/rules
=====================================
@@ -5,7 +5,7 @@
 export DEB_BUILD_MAINT_OPTIONS = hardening=+all
 
 %:
-	dh $@ --with linktree
+	dh $@
 
 override_dh_auto_configure:
 	dh_auto_configure -- $(if $(filter librostlab-doc,$(shell dh_listpackages)),--enable-doxygen-dot --enable-doxygen-pdf)


=====================================
debian/watch
=====================================
@@ -1,4 +1,2 @@
-version=4
-opts=dversionmangle=s/.*/0.No-Site/ \
-https://people.debian.org/~eriberto/ FakeWatchNoUpstreamSiteForThisPackage-(\d\S+)\.gz
-
+Version: 5
+Untrackable: The source code is not available online any more



View it on GitLab: https://salsa.debian.org/med-team/librostlab/-/compare/678f0f933ac18d6a11c2765320ac86f579fdc4ba...10d279d91f26524a570be71b889f64b0a3afc6ba

-- 
View it on GitLab: https://salsa.debian.org/med-team/librostlab/-/compare/678f0f933ac18d6a11c2765320ac86f579fdc4ba...10d279d91f26524a570be71b889f64b0a3afc6ba
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