[med-svn] [Git][med-team/ants][master] 6 commits: New upstream version 2.6.5+dfsg
Andreas Tille (@tille)
gitlab at salsa.debian.org
Wed Sep 2 16:20:09 BST 2026
Andreas Tille pushed to branch master at Debian Med / ants
Commits:
299c98e2 by Andreas Tille at 2026-09-02T16:31:45+02:00
New upstream version 2.6.5+dfsg
- - - - -
f2e3b1ce by Andreas Tille at 2026-09-02T16:31:45+02:00
New upstream version
- - - - -
2fa59415 by Andreas Tille at 2026-09-02T16:31:47+02:00
Update upstream source from tag 'upstream/2.6.5+dfsg'
Update to upstream version '2.6.5+dfsg'
with Debian dir efe0a3996674ce0c842bdcfad22780a7ce9afce7
- - - - -
10014ede by Andreas Tille at 2026-09-02T16:31:47+02:00
Standards-Version: 4.7.4 (routine-update)
- - - - -
cae48d83 by Andreas Tille at 2026-09-02T16:33:36+02:00
Changes made by cme
- - - - -
1389e997 by Andreas Tille at 2026-09-02T15:33:53+01:00
Set upstream metadata fields: Bug-Database, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: source: upstream-metadata-file-is-missing
See-also: https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html
- - - - -
5 changed files:
- Examples/CreateTiledMosaic.cxx
- Version.cmake
- debian/changelog
- debian/control
- + debian/upstream/metadata
Changes:
=====================================
Examples/CreateTiledMosaic.cxx
=====================================
@@ -337,9 +337,8 @@ CreateMosaic(itk::ants::CommandLineParser * parser)
{
if (d != direction)
{
- croppedSliceSize[count] = std::min(
- size[d] - (itk::Math::abs(lowerBoundVector[count]) + itk::Math::abs(upperBoundVector[count])),
- size[d]);
+ croppedSliceSize[count] =
+ size[d] - (itk::Math::abs(lowerBoundVector[count]) + itk::Math::abs(upperBoundVector[count]));
croppedSliceIndex[count] = itk::Math::abs(lowerBoundVector[count]);
count++;
@@ -390,6 +389,7 @@ CreateMosaic(itk::ants::CommandLineParser * parser)
{
std::string offsetString = padWidthString.substr(padWidthString.find(std::string("-")) + 1);
offset = parser->Convert<int>(offsetString);
+ // make offset negative because the minus sign in the string is the delimiter
offset *= -1;
}
@@ -400,7 +400,7 @@ CreateMosaic(itk::ants::CommandLineParser * parser)
if (d != direction)
{
croppedSliceSize[count] = std::min(maskRegion.GetSize()[d] + 2 * offset, size[d]);
- croppedSliceIndex[count] = maskRegion.GetIndex()[d] - offset;
+ croppedSliceIndex[count] = std::max(0, static_cast<int>(maskRegion.GetIndex()[d] - offset));
count++;
}
}
=====================================
Version.cmake
=====================================
@@ -11,7 +11,7 @@ include(ProjectSourceVersion)
set(${PROJECT_NAME}_VERSION_MAJOR "2")
set(${PROJECT_NAME}_VERSION_MINOR "6")
-set(${PROJECT_NAME}_VERSION_PATCH "4")
+set(${PROJECT_NAME}_VERSION_PATCH "5")
# set(${PROJECT_NAME}_VERSION_TWEAK "")
# The hash is the current git sha1 hash tag of the HEAD.
=====================================
debian/changelog
=====================================
@@ -1,11 +1,15 @@
-ants (2.6.4+dfsg-2) UNRELEASED; urgency=medium
+ants (2.6.5+dfsg-1) UNRELEASED; urgency=medium
* Team upload.
* d/copyright: Update Source
* Update Homepage
* d/watch: version=5
+ * New upstream version
+ * Standards-Version: 4.7.4 (routine-update)
+ * Reflow Uploaders field (cme)
+ * Set upstream metadata fields: Bug-Database, Repository-Browse.
- -- Andreas Tille <tille at debian.org> Wed, 02 Sep 2026 16:26:52 +0200
+ -- Andreas Tille <tille at debian.org> Wed, 02 Sep 2026 16:31:45 +0200
ants (2.6.4+dfsg-1) unstable; urgency=medium
=====================================
debian/control
=====================================
@@ -1,36 +1,42 @@
Source: ants
+Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Yaroslav Halchenko <debian at onerussian.com>,
- Michael Hanke <michael.hanke at gmail.com>,
- Pierre Gruet <pgt at debian.org>
+Uploaders:
+ Yaroslav Halchenko <debian at onerussian.com>,
+ Michael Hanke <michael.hanke at gmail.com>,
+ Pierre Gruet <pgt at debian.org>,
Section: science
-Build-Depends: debhelper-compat (= 13),
- help2man,
- cmake,
- libinsighttoolkit5-dev,
- uuid-dev,
- libboost-dev,
- libitkadaptivedenoising-dev,
- libitkgenericlabelinterpolator-dev,
- libtiff-dev,
- libdcmtk-dev | libdcmtk2-dev,
- libfftw3-dev,
- libhdf5-dev,
- libpng-dev
-Standards-Version: 4.7.3
+Build-Depends:
+ debhelper-compat (= 14),
+ help2man,
+ cmake,
+ libinsighttoolkit5-dev,
+ uuid-dev,
+ libboost-dev,
+ libitkadaptivedenoising-dev,
+ libitkgenericlabelinterpolator-dev,
+ libtiff-dev,
+ libdcmtk-dev | libdcmtk2-dev,
+ libfftw3-dev,
+ libhdf5-dev,
+ libpng-dev,
Vcs-Browser: https://salsa.debian.org/med-team/ants
Vcs-Git: https://salsa.debian.org/med-team/ants.git
Homepage: https://github.com/ANTsX/ANTs
Package: ants
Architecture: any
-Depends: ${shlibs:Depends},
- ${perl:Depends},
- ${misc:Depends}
-Recommends: environment-modules
-Suggests: gridengine-client,
- r-base-core
-Conflicts: gpe-conf
+Depends:
+ ${shlibs:Depends},
+ ${perl:Depends},
+ ${misc:Depends},
+Recommends:
+ environment-modules,
+Suggests:
+ gridengine-client,
+ r-base-core,
+Conflicts:
+ gpe-conf,
Description: advanced normalization tools for brain and image analysis
Advanced Normalization Tools (ANTS) is an ITK-based suite of
normalization, segmentation and template-building tools for
=====================================
debian/upstream/metadata
=====================================
@@ -0,0 +1,3 @@
+---
+Bug-Database: https://github.com/ANTsX/ANTs/issues
+Repository-Browse: https://github.com/ANTsX/ANTs
View it on GitLab: https://salsa.debian.org/med-team/ants/-/compare/d115556ef9c5b04e9fc8180c90e22d0cce6e65dd...1389e9974bedc320fecafd24ea75d5d88412d60e
--
View it on GitLab: https://salsa.debian.org/med-team/ants/-/compare/d115556ef9c5b04e9fc8180c90e22d0cce6e65dd...1389e9974bedc320fecafd24ea75d5d88412d60e
You're receiving this email because of your account on salsa.debian.org. Manage all notifications: https://salsa.debian.org/-/profile/notifications | Help: https://salsa.debian.org/help
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20260902/e02cb67f/attachment-0001.htm>
More information about the debian-med-commit
mailing list