[med-svn] [Git][med-team/cmaple][master] 5 commits: Use d-shlibs

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / cmaple


Commits:
154f308c by Andreas Tille at 2026-09-15T07:45:30+02:00
Use d-shlibs

- - - - -
50d48987 by Andreas Tille at 2026-09-15T07:46:37+02:00
Shorten synopsis of lib packages

- - - - -
5cac4b18 by Andreas Tille at 2026-09-15T06:54:34+01:00
Trim trailing whitespace.

Changes-By: lintian-brush
Fixes: lintian: source: trailing-whitespace [debian/rules:EOF]
See-also: https://lintian.debian.org/tags/trailing-whitespace.html

- - - - -
6d185091 by Andreas Tille at 2026-09-15T06:54:36+01:00
Set upstream metadata fields: Bug-Database, Repository-Browse.

Changes-By: lintian-brush

- - - - -
529c78d9 by Andreas Tille at 2026-09-15T07:57:40+02:00
Upload to unstable

- - - - -


6 changed files:

- debian/changelog
- debian/control
- − debian/libcmaple-dev.install
- − debian/libcmaple2.install
- debian/rules
- debian/upstream/metadata


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,12 @@
+cmaple (2.0.0+dfsg-2) unstable; urgency=medium
+
+  * Use d-shlibs
+  * Shorten synopsis of lib packages
+  * Trim trailing whitespace.
+  * Set upstream metadata fields: Bug-Database, Repository-Browse.
+
+ -- Andreas Tille <tille at debian.org>  Tue, 15 Sep 2026 07:54:58 +0200
+
 cmaple (2.0.0+dfsg-1) unstable; urgency=medium
 
   * Initial release (Closes: #1147552)


=====================================
debian/control
=====================================
@@ -6,6 +6,7 @@ Uploaders:
 Section: science
 Build-Depends:
  debhelper-compat (= 14),
+ d-shlibs,
  cmake,
  libsimde-dev,
  zlib1g-dev,
@@ -38,7 +39,7 @@ Architecture: any
 Depends:
  ${shlibs:Depends},
  ${misc:Depends},
-Description: phylogenetic inference method for pandemic-scale epidemiological genomic data (lib)
+Description: phylogenetic inference method for pandemic epidemiological genomic data (lib)
  CMAPLE is a C++ reimplementation of MAPLE - a novel likelihood-based
  phylogenetic inference method for pandemic-scale epidemiological genomic
  data. CMAPLE is highly optimized for performance and scalability with
@@ -57,7 +58,7 @@ Depends:
  libcmaple2 (= ${binary:Version}),
  ${shlibs:Depends},
  ${misc:Depends},
-Description: phylogenetic inference method for pandemic-scale epidemiological genomic data (devel)
+Description: phylogenetic inference method for pandemic epidemiological genomic data (devel)
  CMAPLE is a C++ reimplementation of MAPLE - a novel likelihood-based
  phylogenetic inference method for pandemic-scale epidemiological genomic
  data. CMAPLE is highly optimized for performance and scalability with


=====================================
debian/libcmaple-dev.install deleted
=====================================
@@ -1,3 +0,0 @@
-usr/lib/*/libcmaple.a
-usr/lib/*/libcmaple.so
-usr/include/cmaple
\ No newline at end of file


=====================================
debian/libcmaple2.install deleted
=====================================
@@ -1 +0,0 @@
-usr/lib/*/libcmaple.so.*


=====================================
debian/rules
=====================================
@@ -1,7 +1,15 @@
 #!/usr/bin/make -f
 
 # DH_VERBOSE := 1
-export LC_ALL=C.UTF-8
 
 %:
 	dh $@
+
+override_dh_install:
+	dh_install
+	d-shlibmove --commit \
+		    --multiarch \
+		    --devunversioned \
+		    --exclude-la \
+		    --movedev debian/tmp/usr/include/* usr/include \
+		    debian/tmp/usr/lib/*/*.so


=====================================
debian/upstream/metadata
=====================================
@@ -1,3 +1,4 @@
+Bug-Database: https://github.com/iqtree/cmaple/issues
 Reference:
  - Author: Ly-Trong, Nhan and Bielow, Chris and  De Maio, Nicola and Minh, Bui Quang
    Title: "CMAPLE: Efficient Phylogenetic Inference in the Pandemic Era"
@@ -13,3 +14,4 @@ Reference:
 Registry:
  - Name: conda:bioconda
    Entry: cmaple
+Repository-Browse: https://github.com/iqtree/cmaple



View it on GitLab: https://salsa.debian.org/med-team/cmaple/-/compare/d6f3082a7d6f90cb9116d543ce7695c580cc4a15...529c78d92bdea11252a07d0633fe29d8c236b981

-- 
View it on GitLab: https://salsa.debian.org/med-team/cmaple/-/compare/d6f3082a7d6f90cb9116d543ce7695c580cc4a15...529c78d92bdea11252a07d0633fe29d8c236b981
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