[med-svn] [Git][med-team/libbio-db-hts-perl][upstream] New upstream version 3.02

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / libbio-db-hts-perl


Commits:
49f4b317 by Andreas Tille at 2026-09-21T13:39:49+02:00
New upstream version 3.02
- - - - -


51 changed files:

- + .gitignore
- + .travis.yml
- Build.PL
- Changes
- − DISCLAIMER
- INSTALL.pl
- LICENSE
- + MANIFEST.SKIP
- META.json
- META.yml
- README
- cpanfile
- lib/Bio/DB/HTS.pm
- lib/Bio/DB/HTS.xs
- lib/Bio/DB/HTS/AlignWrapper.pm
- lib/Bio/DB/HTS/Alignment.pm
- lib/Bio/DB/HTS/Constants.pm
- lib/Bio/DB/HTS/Faidx.pm
- lib/Bio/DB/HTS/Faidx.xs
- lib/Bio/DB/HTS/FetchIterator.pm
- lib/Bio/DB/HTS/Kseq.pm
- lib/Bio/DB/HTS/Kseq/Iterator.pod
- lib/Bio/DB/HTS/Kseq/Record.pm
- lib/Bio/DB/HTS/Pileup.pm
- lib/Bio/DB/HTS/PileupWrapper.pm
- lib/Bio/DB/HTS/Query.pm
- lib/Bio/DB/HTS/ReadIterator.pm
- lib/Bio/DB/HTS/Segment.pm
- lib/Bio/DB/HTS/Tabix.pm
- lib/Bio/DB/HTS/Tabix/Iterator.pm
- lib/Bio/DB/HTS/Target.pm
- lib/Bio/DB/HTS/VCF.pm
- lib/Bio/DB/HTS/VCF/Header.pm
- lib/Bio/DB/HTS/VCF/HeaderPtr.pm
- lib/Bio/DB/HTS/VCF/Iterator.pm
- lib/Bio/DB/HTS/VCF/Row.pm
- lib/Bio/DB/HTS/VCF/RowPtr.pm
- scripts/build_options.sh
- scripts/convert_gz_2_bgz.sh
- t/00load.t
- t/01bam.t
- t/02faidx.t
- t/03cram.t
- t/04tabix.t
- t/05vcf.t
- t/06kseq.t
- t/07cramwrite.t
- t/08bamwrite.t
- t/09sam.t
- t/10leak.t
- + travisci/harness.sh


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libbio-db-hts-perl/-/commit/49f4b31701f501bfe5f81e2796a0028d791ea375

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View it on GitLab: https://salsa.debian.org/med-team/libbio-db-hts-perl/-/commit/49f4b31701f501bfe5f81e2796a0028d791ea375
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