[med-svn] [Git][med-team/ariba][master] Patch forwarded upstream

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / ariba


Commits:
51ca9705 by Andreas Tille at 2026-09-21T18:08:52+02:00
Patch forwarded upstream

- - - - -


1 changed file:

- debian/patches/faidx-pysam-0.24.patch


Changes:

=====================================
debian/patches/faidx-pysam-0.24.patch
=====================================
@@ -6,7 +6,7 @@ Description: Fix write_fa_subset with pysam >= 0.24
  output files and broke ariba/tests/faidx_test.py::test_write_fa_subset.
  Fetch sequences via pysam.FastaFile instead, which works with all
  supported pysam versions.
-Forwarded: no
+Forwarded: https://github.com/sanger-pathogens/ariba/issues/349
 Last-Update: 2026-09-21
 
 --- a/ariba/faidx.py



View it on GitLab: https://salsa.debian.org/med-team/ariba/-/commit/51ca970561fc3e8fec653c8fd8267c38ef72169a

-- 
View it on GitLab: https://salsa.debian.org/med-team/ariba/-/commit/51ca970561fc3e8fec653c8fd8267c38ef72169a
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