[Debian-med-packaging] Bug#495650: Non-existant default dir in /etc/arb/arb_tcp.dat

[Felipe Figueiredo]

Package: arb
Version: 0.0.20071207.1-4
Severity: normal
Tags: patch

The default ARB_NAME_SERVER in the arb configuration is /var/lib/arb/lib/nas/, whereas the default one created by 
the deb is /var/lib/arb/nas/. Since this resides in /etc, it's inaccessible for local users to change.



-- System Information:
Debian Release: lenny/sid
  APT prefers testing
  APT policy: (500, 'testing')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.25-2-amd64 (SMP w/4 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash

Versions of packages arb depends on:
ii  arb-common              0.0.20071207.1-4 Integrated package for sequence da11111
ii  fastdnaml               1.2.2-8          Tool for construction of phylogene
ii  freeglut3               2.4.0-6.1        OpenGL Utility Toolkit
di  libarb                  0.0.20071207.1-4 Integrated package for sequence da
ii  libc6                   2.7-13           GNU C Library: Shared libraries
ii  libgcc1                 1:4.3.1-2        GCC support library
ii  libgl1-mesa-glx [libgl1 7.0.3-5          A free implementation of the OpenG
ii  libglew1.5              1.5.0dfsg1-3     The OpenGL Extension Wrangler - ru
ii  libglu1-mesa [libglu1]  7.0.3-5          The OpenGL utility library (GLU)
ii  libglw1-mesa [libglw1]  7.0.3-5          A free implementation of the OpenG
ii  libmotif3               2.2.3-2          Open Motif - shared libraries
ii  libpng12-0              1.2.27-1         PNG library - runtime
ii  libstdc++6              4.3.1-2          The GNU Standard C++ Library v3
ii  libtiff4                3.8.2-10         Tag Image File Format (TIFF) libra
ii  libx11-6                2:1.1.4-2        X11 client-side library
ii  libxext6                2:1.0.4-1        X11 miscellaneous extension librar
ii  libxp6                  1:1.0.0.xsf1-2   X Printing Extension (Xprint) clie
ii  libxpm4                 1:3.5.7-1        X11 pixmap library
ii  libxt6                  1:1.0.5-3        X11 toolkit intrinsics library
ii  molphy                  2.3b3-5          Program Package for MOLecular PHYl
ii  phylip                  1:3.67-3         [Biology] A package of programs fo
ii  readseq                 1-7              [Biology] Conversion between seque
ii  ssh                     1:4.7p1-12       secure shell client and server (me
ii  transfig                1:3.2.5-rel-3.1  Utilities for converting XFig figu
ii  tree-puzzle             5.2-4            Reconstruction of phylogenetic tre
di  xviewg                  3.2p1.4-21.1     XView shared libraries

Versions of packages arb recommends:
ii  xfig                       1:3.2.5-rel-2 Facility for Interactive Generatio

Versions of packages arb suggests:
pn  arb-database                  <none>     (no description available)
ii  gnuplot                       4.2.2-1.1  A command-line driven interactive 
ii  gv                            1:3.6.5-2  PostScript and PDF viewer for X

-- no debconf information
-------------- next part --------------
--- arb_tcp.dat.bak	2008-08-19 08:11:55.000000000 -0300
+++ arb_tcp.dat	2008-08-19 08:12:26.000000000 -0300
@@ -51,8 +51,8 @@
 # You may define additional nameservers, using one additional field for identification.
 # The defined nameserver 'ARB_NAME_SERVER_START' uses the fields 'acc' and 'start'.
 
-ARB_NAME_SERVER         localhost:3020		arb_name_server	-d/var/lib/arb/lib/nas/names.dat
-ARB_NAME_SERVER_START   localhost:3021		arb_name_server	-d/var/lib/arb/lib/nas/names_start.dat -fstart
+ARB_NAME_SERVER         localhost:3020		arb_name_server	-d/var/lib/arb/nas/names.dat
+ARB_NAME_SERVER_START   localhost:3021		arb_name_server	-d/var/lib/arb/nas/names_start.dat -fstart
 
 #***********	PT_SERVERS The server should run on the nfs server ******************
 #*******     You may add new pt_servers here: (numbers must be continued)   *********