[Debian-med-packaging] last-align_31-1_amd64.changes is NEW
Debian Installer
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Sat Dec 13 15:17:02 UTC 2008
(new) last-align_31-1.diff.gz optional science
(new) last-align_31-1.dsc optional science
(new) last-align_31-1_amd64.deb optional science
genome-scale comparison of biological sequences
LAST is software for comparing and aligning sequences, typically DNA or
protein sequences. LAST is similar to BLAST, but it copes better with very
large amounts of sequence data. Here are two things LAST is good at:
.
* Comparing large (e.g. mammalian) genomes.
* Mapping lots of sequence tags onto a genome.
.
The main technical innovation is that LAST finds initial matches based on
their multiplicity, instead of using a fixed size (e.g. BLAST uses 11-mers).
This allows us to map tags to genomes without repeat-masking, without becoming
overwhelmed by repetitive hits. To find these variable-sized matches, it uses
a suffix array (inspired by Vmatch). To achieve high sensitivity, it uses a
discontiguous suffix array, analogous to spaced seeds.
(new) last-align_31.orig.tar.gz optional science
Changes: last-align (31-1) unstable; urgency=low
.
* Initial release (Closes: #498562)
Override entries for your package:
Announcing to debian-devel-changes at lists.debian.org
Closing bugs: 498562
Your package contains new components which requires manual editing of
the override file. It is ok otherwise, so please be patient. New
packages are usually added to the override file about once a week.
You may have gotten the distribution wrong. You'll get warnings above
if files already exist in other distributions.
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