[Debian-med-packaging] Bug#562775: FTBFS: Could not find vtk.jar file, VTK_JAVA_JAR is wrong, please set proper GDCM_VTK_JAVA_JAR replacement var

[Christoph Egger]

Package: gdcm
Version: 2.0.14-2
Severity: serious
Justification: fails to build from source

	In a clean cowbuilder gdcm fails to build from source on
armel. Excerpt from the buildlog below, the full log attached.

-- Looking for include files HAVE_SYS_TIME_H
-- Looking for include files HAVE_SYS_TIME_H - found
-- Looking for include files HAVE_WINSOCK_H
-- Looking for include files HAVE_WINSOCK_H - not found.
-- Looking for include files HAVE_BYTESWAP_H
-- Looking for include files HAVE_BYTESWAP_H - found
-- Looking for rpc.h
-- Looking for rpc.h - not found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for _stricmp
-- Looking for _stricmp - not found
-- Looking for _strnicmp
-- Looking for _strnicmp - not found
-- Looking for _snprintf
-- Looking for _snprintf - not found
-- Looking for gettimeofday
-- Looking for gettimeofday - found
You are using the SWIG version of VTKGDCM. This is not compatible with Activiz
-- Java version 1.6.0.0 configured successfully!
Implicitely adding debian package layout...
CMake Error at Utilities/VTK/CMakeLists.txt:268 (message):
  Could not find vtk.jar file, VTK_JAVA_JAR is wrong, please set proper
  GDCM_VTK_JAVA_JAR replacement var


-- Configuring incomplete, errors occurred!
make: *** [debian/configure-python2.5-stamp] Error 1
dpkg-buildpackage: error: debian/rules build gave error exit status 2

-- System Information:
Debian Release: squeeze/sid
  APT prefers testing
  APT policy: (990, 'testing'), (500, 'stable'), (400, 'unstable'), (100, 'experimental')
Architecture: i386 (x86_64)

Kernel: Linux 2.6.31-1-amd64 (SMP w/2 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

-- 
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http://www.christoph-egger.org/
-------------- next part --------------
 -> Running in no-targz mode
I: using fakeroot in build.
Current time: Sat Dec 26 18:25:10 UTC 2009
pbuilder-time-stamp: 1261851910
 -> copying local configuration
 -> mounting /proc filesystem
 -> mounting /dev/pts filesystem
 -> policy-rc.d already exists
Obtaining the cached apt archive contents
Installing the build-deps
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armel
Maintainer: Debian Pbuilder Team <pbuilder-maint at lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder and should
Depends: debhelper (>= 7), python-dev, quilt, libvtk-java, python-support (>= 0.5.3), uuid-dev, zlib1g-dev, libexpat1-dev, doxygen, swig, cmake, libvtk5-dev, python-vtk, libpng12-dev | libpng-dev, libjpeg62-dev, libtiff4-dev, libfreetype6-dev, libopenjpeg-dev, graphviz, libxext-dev, libxss-dev, libxft-dev, default-jdk, libpoppler-dev, libssl-dev, texlive-extra-utils, ghostscript, cli-common-dev (>= 0.5.7), mono-devel (>= 2.0)
dpkg-deb: building package `pbuilder-satisfydepends-dummy' in `/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Reading package lists...
Building dependency tree...
Reading state information...
aptitude is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Selecting previously deselected package pbuilder-satisfydepends-dummy.
(Reading database ... 11097 files and directories currently installed.)
Unpacking pbuilder-satisfydepends-dummy (from .../pbuilder-satisfydepends-dummy.deb) ...
dpkg: dependency problems prevent configuration of pbuilder-satisfydepends-dummy:
 pbuilder-satisfydepends-dummy depends on debhelper (>= 7); however:
  Package debhelper is not installed.
 pbuilder-satisfydepends-dummy depends on python-dev; however:
  Package python-dev is not installed.
 pbuilder-satisfydepends-dummy depends on quilt; however:
  Package quilt is not installed.
 pbuilder-satisfydepends-dummy depends on libvtk-java; however:
  Package libvtk-java is not installed.
 pbuilder-satisfydepends-dummy depends on python-support (>= 0.5.3); however:
  Package python-support is not installed.
 pbuilder-satisfydepends-dummy depends on uuid-dev; however:
  Package uuid-dev is not installed.
 pbuilder-satisfydepends-dummy depends on zlib1g-dev; however:
  Package zlib1g-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libexpat1-dev; however:
  Package libexpat1-dev is not installed.
 pbuilder-satisfydepends-dummy depends on doxygen; however:
  Package doxygen is not installed.
 pbuilder-satisfydepends-dummy depends on swig; however:
  Package swig is not installed.
 pbuilder-satisfydepends-dummy depends on cmake; however:
  Package cmake is not installed.
 pbuilder-satisfydepends-dummy depends on libvtk5-dev; however:
  Package libvtk5-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python-vtk; however:
  Package python-vtk is not installed.
 pbuilder-satisfydepends-dummy depends on libpng12-dev | libpng-dev; however:
  Package libpng12-dev is not installed.
  Package libpng-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libjpeg62-dev; however:
  Package libjpeg62-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libtiff4-dev; however:
  Package libtiff4-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libfreetype6-dev; however:
  Package libfreetype6-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libopenjpeg-dev; however:
  Package libopenjpeg-dev is not installed.
 pbuilder-satisfydepends-dummy depends on graphviz; however:
  Package graphviz is not installed.
 pbuilder-satisfydepends-dummy depends on libxext-dev; however:
  Package libxext-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxss-dev; however:
  Package libxss-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libxft-dev; however:
  Package libxft-dev is not installed.
 pbuilder-satisfydepends-dummy depends on default-jdk; however:
  Package default-jdk is not installed.
 pbuilder-satisfydepends-dummy depends on libpoppler-dev; however:
  Package libpoppler-dev is not installed.
 pbuilder-satisfydepends-dummy depends on libssl-dev; however:
  Package libssl-dev is not installed.
 pbuilder-satisfydepends-dummy depends on texlive-extra-utils; however:
  Package texlive-extra-utils is not installed.
 pbuilder-satisfydepends-dummy depends on ghostscript; however:
  Package ghostscript is not installed.
 pbuilder-satisfydepends-dummy depends on cli-common-dev (>= 0.5.7); however:
  Package cli-common-dev is not installed.
 pbuilder-satisfydepends-dummy depends on mono-devel (>= 2.0); however:
  Package mono-devel is not installed.
dpkg: error processing pbuilder-satisfydepends-dummy (--install):
 dependency problems - leaving unconfigured
Errors were encountered while processing:
 pbuilder-satisfydepends-dummy
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
The following packages are BROKEN:
  gcj-jre-headless 
The following NEW packages will be installed:
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The following partially installed packages will be configured:
  pbuilder-satisfydepends-dummy 
0 packages upgraded, 332 newly installed, 0 to remove and 0 not upgraded.
Need to get 115MB/230MB of archives. After unpacking 635MB will be used.
The following packages have unmet dependencies:
  gcj-jre-headless: Conflicts: java-gcj-compat-headless (< 1.0.80-6) but 1.0.80-5.1 is to be installed.
The following actions will resolve these dependencies:

Keep the following packages at their current version:
java-gcj-compat [Not Installed]
java-gcj-compat-headless [Not Installed]

Tier: Safe actions (10000)

The following NEW packages will be installed:
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  libopenjpeg-dev{a} libopenjpeg2{a} libpango1.0-0{a} libpango1.0-common{a} 
  libpaper1{a} libpcre3{a} libpixman-1-0{a} libpng12-0{a} libpng12-dev{a} 
  libpoppler-dev{a} libpoppler5{a} libpopt0{a} libpthread-stubs0{a} 
  libpthread-stubs0-dev{a} libpulse0{a} libsasl2-2{a} 
  libschroedinger-1.0-0{a} libsm-dev{a} libsm6{a} libsndfile1{a} 
  libspeex1{a} libsqlite0{a} libssl-dev{a} libswscale0{a} libsysfs2{a} 
  libtasn1-3{a} libthai-data{a} libthai0{a} libtheora0{a} libtiff4{a} 
  libtiff4-dev{a} libtiffxx0c2{a} libts-0.0-0{a} liburi-perl{a} 
  libvorbis0a{a} libvorbisenc2{a} libvtk-java{a} libvtk5-dev{a} 
  libvtk5.2{a} libwrap0{a} libwww-perl{a} libx11-6{a} libx11-data{a} 
  libx11-dev{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-render-util0{a} 
  libxcb-render0{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} 
  libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} 
  libxext6{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi6{a} 
  libxinerama1{a} libxml-dom-perl{a} libxml-parser-perl{a} libxml-perl{a} 
  libxml-regexp-perl{a} libxml2{a} libxmu6{a} libxpm4{a} libxrandr2{a} 
  libxrender-dev{a} libxrender1{a} libxss-dev{a} libxss1{a} libxt-dev{a} 
  libxt6{a} libxtst6{a} libxxf86vm1{a} luatex{a} man-db{a} 
  mesa-common-dev{a} mime-support{a} mono-2.0-devel{a} mono-2.0-gac{a} 
  mono-devel{a} mono-gac{a} mono-gmcs{a} mono-runtime{a} mono-utils{a} 
  mysql-common{a} netbase{a} openjdk-6-jdk{a} openjdk-6-jre{a} 
  openjdk-6-jre-headless{a} openjdk-6-jre-lib{a} openssl{a} pkg-config{a} 
  po-debconf{a} python{a} python-central{a} python-dev{a} python-minimal{a} 
  python-support{a} python-vtk{a} python2.5{a} python2.5-dev{a} 
  python2.5-minimal{a} quilt{a} rhino{a} shared-mime-info{a} swig{a} 
  tcl8.5{a} tex-common{a} texlive-base{a} texlive-binaries{a} 
  texlive-common{a} texlive-doc-base{a} texlive-extra-utils{a} tk8.5{a} 
  tsconf{a} ttf-dejavu{a} ttf-dejavu-core{a} ttf-dejavu-extra{a} 
  tzdata-java{a} ucf{a} uuid-dev{a} whiptail{a} x11-common{a} 
  x11proto-core-dev{a} x11proto-input-dev{a} x11proto-kb-dev{a} 
  x11proto-render-dev{a} x11proto-scrnsaver-dev{a} x11proto-xext-dev{a} 
  xtrans-dev{a} zlib1g-dev{a} 
The following partially installed packages will be configured:
  pbuilder-satisfydepends-dummy 
0 packages upgraded, 319 newly installed, 0 to remove and 0 not upgraded.
Need to get 115MB/208MB of archives. After unpacking 587MB will be used.
Writing extended state information...
Get:1 ftp://ftp.de.debian.org sid/main python-dev 2.5.4-5 [930B]
Get:2 ftp://ftp.de.debian.org sid/main libogg0 1.1.4~dfsg-2 [15.0kB]
Get:3 ftp://ftp.de.debian.org sid/main libtheora0 1.1.1+dfsg.1-3 [400kB]
Get:4 ftp://ftp.de.debian.org sid/main libavformat52 4:0.5+svn20090706-2+b1 [369kB]
Get:5 ftp://ftp.de.debian.org sid/main libgl2ps0 1.3.5-1 [41.1kB]
Get:6 ftp://ftp.de.debian.org sid/main liblam4 7.1.2-1.5 [542kB]
Get:7 ftp://ftp.de.debian.org sid/main mysql-common 5.1.41-3 [93.8kB]
Get:8 ftp://ftp.de.debian.org sid/main libmysqlclient16 5.1.41-3 [1864kB]
Get:9 ftp://ftp.de.debian.org sid/main libswscale0 4:0.5+svn20090706-2+b1 [97.4kB]
Get:10 ftp://ftp.de.debian.org sid/main libvtk5.2 5.2.1-14 [10.8MB]
Get:11 ftp://ftp.de.debian.org sid/main openjdk-6-jre-lib 6b17~pre3-1 [5245kB]
Get:12 ftp://ftp.de.debian.org sid/main libnss3-1d 3.12.5-1 [1023kB]
Get:13 ftp://ftp.de.debian.org sid/main openjdk-6-jre-headless 6b17~pre3-1 [23.4MB]
Get:14 ftp://ftp.de.debian.org sid/main libsndfile1 1.0.21-2 [259kB]
Get:15 ftp://ftp.de.debian.org sid/main openjdk-6-jre 6b17~pre3-1 [260kB]
Get:16 ftp://ftp.de.debian.org sid/main libvtk-java 5.2.1-14 [3739kB]
Get:17 ftp://ftp.de.debian.org sid/main libvtk5-dev 5.2.1-14 [2079kB]
Get:18 ftp://ftp.de.debian.org sid/main python-vtk 5.2.1-14 [3638kB]
Get:19 ftp://ftp.de.debian.org sid/main libopenjpeg-dev 1.3+dfsg-4 [94.0kB]
Get:20 ftp://ftp.de.debian.org sid/main openjdk-6-jdk 6b17~pre3-1 [9185kB]
Get:21 ftp://ftp.de.debian.org sid/main libpoppler5 0.12.2-2 [874kB]
Get:22 ftp://ftp.de.debian.org sid/main libpoppler-dev 0.12.2-2 [1268kB]
Get:23 ftp://ftp.de.debian.org sid/main tex-common 2.03 [724kB]
Get:24 ftp://ftp.de.debian.org sid/main texlive-common 2009-6 [97.8kB]
Get:25 ftp://ftp.de.debian.org sid/main texlive-doc-base 2009-2 [1345kB]
Get:26 ftp://ftp.de.debian.org sid/main luatex 0.50.0-1 [2204kB]
Get:27 ftp://ftp.de.debian.org sid/main libkpathsea5 2009-4 [130kB]
Get:28 ftp://ftp.de.debian.org sid/main texlive-binaries 2009-4 [7777kB]
Get:29 ftp://ftp.de.debian.org sid/main texlive-base 2009-6 [14.9MB]
Get:30 ftp://ftp.de.debian.org sid/main texlive-extra-utils 2009-6 [1583kB]
Get:31 ftp://ftp.de.debian.org sid/main libcupsimage2 1.4.2-5 [117kB]
Get:32 ftp://ftp.de.debian.org sid/main libmono0 2.4.3+dfsg-1 [1025kB]
Get:33 ftp://ftp.de.debian.org sid/main libmono-system2.0-cil 2.4.3+dfsg-1 [1528kB]
Get:34 ftp://ftp.de.debian.org sid/main libmono-security2.0-cil 2.4.3+dfsg-1 [140kB]
Get:35 ftp://ftp.de.debian.org sid/main mono-2.0-gac 2.4.3+dfsg-1 [36.7kB]
Get:36 ftp://ftp.de.debian.org sid/main mono-gac 2.4.3+dfsg-1 [28.8kB]
Get:37 ftp://ftp.de.debian.org sid/main mono-runtime 2.4.3+dfsg-1 [1159kB]
Get:38 ftp://ftp.de.debian.org sid/main libmono-corlib2.0-cil 2.4.3+dfsg-1 [906kB]
Get:39 ftp://ftp.de.debian.org sid/main libmono-corlib1.0-cil 2.4.3+dfsg-1 [747kB]
Get:40 ftp://ftp.de.debian.org sid/main mono-utils 2.4.3+dfsg-1 [787kB]
Get:41 ftp://ftp.de.debian.org sid/main libmono-cecil-private-cil 2.4.3+dfsg-1 [172kB]
Get:42 ftp://ftp.de.debian.org sid/main libmono-getoptions2.0-cil 2.4.3+dfsg-1 [43.6kB]
Get:43 ftp://ftp.de.debian.org sid/main libmono-system1.0-cil 2.4.3+dfsg-1 [950kB]
Get:44 ftp://ftp.de.debian.org sid/main libmono-relaxng1.0-cil 2.4.3+dfsg-1 [107kB]
Get:45 ftp://ftp.de.debian.org sid/main libmono-security1.0-cil 2.4.3+dfsg-1 [139kB]
Get:46 ftp://ftp.de.debian.org sid/main libmono-data-tds2.0-cil 2.4.3+dfsg-1 [58.0kB]
Get:47 ftp://ftp.de.debian.org sid/main libmono-system-data2.0-cil 2.4.3+dfsg-1 [340kB]
Get:48 ftp://ftp.de.debian.org sid/main libmono-data-tds1.0-cil 2.4.3+dfsg-1 [54.3kB]
Get:49 ftp://ftp.de.debian.org sid/main libmono-system-data1.0-cil 2.4.3+dfsg-1 [246kB]
Get:50 ftp://ftp.de.debian.org sid/main libexif12 0.6.19-1 [496kB]
Get:51 ftp://ftp.de.debian.org sid/main libgdiplus 2.4.2-1+b1 [153kB]
Get:52 ftp://ftp.de.debian.org sid/main libmono-system-web1.0-cil 2.4.3+dfsg-1 [440kB]
Get:53 ftp://ftp.de.debian.org sid/main libmono-system-runtime1.0-cil 2.4.3+dfsg-1 [103kB]
Get:54 ftp://ftp.de.debian.org sid/main libmono-peapi2.0-cil 2.4.3+dfsg-1 [66.5kB]
Get:55 ftp://ftp.de.debian.org sid/main libmono-posix2.0-cil 2.4.3+dfsg-1 [97.1kB]
Get:56 ftp://ftp.de.debian.org sid/main libmono-sharpzip2.84-cil 2.4.3+dfsg-1 [80.5kB]
Get:57 ftp://ftp.de.debian.org sid/main libmono-sqlite2.0-cil 2.4.3+dfsg-1 [89.8kB]
Get:58 ftp://ftp.de.debian.org sid/main libmono2.0-cil 2.4.3+dfsg-1 [64.8kB]
Get:59 ftp://ftp.de.debian.org sid/main libmono-system-web2.0-cil 2.4.3+dfsg-1 [1305kB]
Get:60 ftp://ftp.de.debian.org sid/main mono-gmcs 2.4.3+dfsg-1 [391kB]
Get:61 ftp://ftp.de.debian.org sid/main libmono-dev 2.4.3+dfsg-1 [1409kB]
Get:62 ftp://ftp.de.debian.org sid/main mono-2.0-devel 2.4.3+dfsg-1 [215kB]
Get:63 ftp://ftp.de.debian.org sid/main libmono-posix1.0-cil 2.4.3+dfsg-1 [97.0kB]
Get:64 ftp://ftp.de.debian.org sid/main libmono-sharpzip0.84-cil 2.4.3+dfsg-1 [80.4kB]
Get:65 ftp://ftp.de.debian.org sid/main libmono1.0-cil 2.4.3+dfsg-1 [58.5kB]
Get:66 ftp://ftp.de.debian.org sid/main libmono-getoptions1.0-cil 2.4.3+dfsg-1 [43.5kB]
Get:67 ftp://ftp.de.debian.org sid/main libmono-data1.0-cil 2.4.3+dfsg-1 [110kB]
Get:68 ftp://ftp.de.debian.org sid/main libmono-data2.0-cil 2.4.3+dfsg-1 [115kB]
Get:69 ftp://ftp.de.debian.org sid/main libmono-c5-1.0-cil 2.4.3+dfsg-1 [128kB]
Get:70 ftp://ftp.de.debian.org sid/main libmono-webbrowser0.5-cil 2.4.3+dfsg-1 [84.4kB]
Get:71 ftp://ftp.de.debian.org sid/main cli-common 0.7 [183kB]
Get:72 ftp://ftp.de.debian.org sid/main libmono-system-runtime2.0-cil 2.4.3+dfsg-1 [108kB]
Get:73 ftp://ftp.de.debian.org sid/main libnunit2.4-cil 2.4.7+dfsg-4 [118kB]
Get:74 ftp://ftp.de.debian.org sid/main libmono-nunit2.4-cil 2.4.3+dfsg-1 [23.6kB]
Get:75 ftp://ftp.de.debian.org sid/main libmono-management2.0-cil 2.4.3+dfsg-1 [27.9kB]
Get:76 ftp://ftp.de.debian.org sid/main libmono-messaging2.0-cil 2.4.3+dfsg-1 [35.4kB]
Get:77 ftp://ftp.de.debian.org sid/main libmono-simd2.0-cil 2.4.3+dfsg-1 [44.4kB]
Get:78 ftp://ftp.de.debian.org sid/main libmono-i18n-west1.0-cil 2.4.3+dfsg-1 [50.9kB]
Get:79 ftp://ftp.de.debian.org sid/main libmono-i18n1.0-cil 2.4.3+dfsg-1 [375kB]
Get:80 ftp://ftp.de.debian.org sid/main libmono-i18n-west2.0-cil 2.4.3+dfsg-1 [52.4kB]
Get:81 ftp://ftp.de.debian.org sid/main libmono-i18n2.0-cil 2.4.3+dfsg-1 [377kB]
Get:82 ftp://ftp.de.debian.org sid/main libmono-system-messaging1.0-cil 2.4.3+dfsg-1 [52.3kB]
Get:83 ftp://ftp.de.debian.org sid/main libmono-system-messaging2.0-cil 2.4.3+dfsg-1 [52.4kB]
Get:84 ftp://ftp.de.debian.org sid/main libmono-system-web-mvc1.0-cil 2.4.3+dfsg-1 [104kB]
Get:85 ftp://ftp.de.debian.org sid/main libmono-wcf3.0-cil 2.4.3+dfsg-1 [541kB]
Get:86 ftp://ftp.de.debian.org sid/main libmono-ldap1.0-cil 2.4.3+dfsg-1 [123kB]
Get:87 ftp://ftp.de.debian.org sid/main libmono-system-ldap1.0-cil 2.4.3+dfsg-1 [41.6kB]
Get:88 ftp://ftp.de.debian.org sid/main libmono-ldap2.0-cil 2.4.3+dfsg-1 [123kB]
Get:89 ftp://ftp.de.debian.org sid/main libmono-system-ldap2.0-cil 2.4.3+dfsg-1 [41.8kB]
Get:90 ftp://ftp.de.debian.org sid/main libmono-accessibility1.0-cil 2.4.3+dfsg-1 [26.9kB]
Get:91 ftp://ftp.de.debian.org sid/main libmono-winforms1.0-cil 2.4.3+dfsg-1 [842kB]
Get:92 ftp://ftp.de.debian.org sid/main libmono-accessibility2.0-cil 2.4.3+dfsg-1 [26.9kB]
Get:93 ftp://ftp.de.debian.org sid/main libmono-winforms2.0-cil 2.4.3+dfsg-1 [1198kB]
Get:94 ftp://ftp.de.debian.org sid/main libmono-cairo1.0-cil 2.4.3+dfsg-1 [45.0kB]
Get:95 ftp://ftp.de.debian.org sid/main libmono-cairo2.0-cil 2.4.3+dfsg-1 [45.1kB]
Get:96 ftp://ftp.de.debian.org sid/main libmono-sharpzip0.6-cil 2.4.3+dfsg-1 [70.6kB]
Get:97 ftp://ftp.de.debian.org sid/main libmono-sharpzip2.6-cil 2.4.3+dfsg-1 [70.6kB]
Get:98 ftp://ftp.de.debian.org sid/main libmono-npgsql1.0-cil 2.4.3+dfsg-1 [88.6kB]
Get:99 ftp://ftp.de.debian.org sid/main libmono-npgsql2.0-cil 2.4.3+dfsg-1 [88.8kB]
Get:100 ftp://ftp.de.debian.org sid/main libmono-bytefx0.7.6.1-cil 2.4.3+dfsg-1 [66.2kB]
Get:101 ftp://ftp.de.debian.org sid/main libmono-bytefx0.7.6.2-cil 2.4.3+dfsg-1 [66.4kB]
Get:102 ftp://ftp.de.debian.org sid/main libmono-db2-1.0-cil 2.4.3+dfsg-1 [53.1kB]
Get:103 ftp://ftp.de.debian.org sid/main libmono-oracle1.0-cil 2.4.3+dfsg-1 [78.0kB]
Get:104 ftp://ftp.de.debian.org sid/main libmono-oracle2.0-cil 2.4.3+dfsg-1 [81.7kB]
Get:105 ftp://ftp.de.debian.org sid/main libmono-sqlite1.0-cil 2.4.3+dfsg-1 [57.5kB]
Get:106 ftp://ftp.de.debian.org sid/main libmono-cscompmgd7.0-cil 2.4.3+dfsg-1 [29.4kB]
Get:107 ftp://ftp.de.debian.org sid/main libmono-cscompmgd8.0-cil 2.4.3+dfsg-1 [29.8kB]
Get:108 ftp://ftp.de.debian.org sid/main libmono-microsoft-build2.0-cil 2.4.3+dfsg-1 [181kB]
Get:109 ftp://ftp.de.debian.org sid/main libmono-microsoft7.0-cil 2.4.3+dfsg-1 [153kB]
Get:110 ftp://ftp.de.debian.org sid/main libmono-microsoft8.0-cil 2.4.3+dfsg-1 [154kB]
Get:111 ftp://ftp.de.debian.org sid/main libmono-peapi1.0-cil 2.4.3+dfsg-1 [66.4kB]
Get:112 ftp://ftp.de.debian.org sid/main libmono-relaxng2.0-cil 2.4.3+dfsg-1 [108kB]
Get:113 ftp://ftp.de.debian.org sid/main libmono-cil-dev 2.4.3+dfsg-1 [25.3kB]
Get:114 ftp://ftp.de.debian.org sid/main mono-devel 2.4.3+dfsg-1 [301kB]
Get:115 ftp://ftp.de.debian.org sid/main cli-common-dev 0.7 [41.6kB]
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Setting up ttf-dejavu (2.30-2) ...
Setting up fontconfig-config (2.6.0-4.2) ...
Setting up libfontconfig1 (2.6.0-4.2) ...
Setting up libxrender1 (1:0.9.5-1) ...
Setting up libxft2 (2.1.14-1) ...
Setting up libxss1 (1:1.1.3-1) ...
Setting up libxt6 (1:1.0.7-1) ...
Setting up libvtk5.2 (5.2.1-14) ...
Setting up openssl (0.9.8k-7) ...
Setting up ca-certificates (20090814) ...
Updating certificates in /etc/ssl/certs... WARNING: Skipping duplicate certificate brasil.gov.br.pem
141 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d....done.
Setting up java-common (0.34) ...
Setting up tzdata-java (2009s-1) ...
Setting up gcj-4.4-base (4.4.2-4) ...
Setting up python-central (0.6.14+nmu2) ...
Setting up libgcj-common (1:4.4.2-2) ...
Setting up libgcj10 (4.4.2-4) ...
Setting up gcj-4.4-jre-headless (4.4.2-4) ...
gcj-dbtool succeeded unexpectedly
Setting up gcj-jre-headless (4:4.4.2-2) ...
Setting up libjline-java (0.9.94-5) ...
Setting up rhino (1.7R2-3) ...
update-alternatives: using /usr/bin/rhino to provide /usr/bin/js (js) in auto mode.
Setting up libavahi-common-data (0.6.25-2) ...
Setting up libavahi-common3 (0.6.25-2) ...
Setting up libdbus-1-3 (1.2.16-2+b2) ...
Setting up libavahi-client3 (0.6.25-2) ...
Setting up libgpg-error0 (1.6-1) ...
Setting up libgcrypt11 (1.4.5-1) ...
Setting up libtasn1-3 (2.3-1+b2) ...
Setting up libgnutls26 (2.8.5-2) ...
Setting up libkeyutils1 (1.2-12) ...
Setting up libkrb5support0 (1.7+dfsg-3) ...
Setting up libk5crypto3 (1.7+dfsg-3) ...
Setting up libkrb5-3 (1.7+dfsg-3) ...
Setting up libgssapi-krb5-2 (1.7+dfsg-3) ...
Setting up libcups2 (1.4.2-5) ...
Setting up liblcms1 (1.18.dfsg-1) ...
Setting up libnspr4-0d (4.8.2-1) ...
Setting up libnss3-1d (3.12.5-1) ...
Setting up libasound2 (1.0.21a-1) ...
Setting up libgif4 (4.1.6-8) ...
Setting up libasyncns0 (0.3-1) ...
Setting up libcap2 (1:2.17-2) ...
Setting up libflac8 (1.2.1-2+b2) ...
Setting up libsndfile1 (1.0.21-2) ...
Setting up libwrap0 (7.6.q-18) ...
Setting up libxtst6 (2:1.0.3-1) ...
Setting up libpulse0 (0.9.21-1) ...
Setting up libxi6 (2:1.2.1-2) ...
Setting up libatk1.0-0 (1.28.0-1) ...
Setting up libsysfs2 (2.1.0-6) ...
Setting up tsconf (1.0-7) ...
Setting up libts-0.0-0 (1.0-7) ...
Setting up libdirectfb-1.2-0 (1.2.8-5) ...
Setting up libpixman-1-0 (0.16.2-1) ...
Setting up libxcb-render0 (1.5-2) ...
Setting up libxcb-render-util0 (0.3.6-1) ...
Setting up libcairo2 (1.8.8-2) ...
Setting up libgtk2.0-common (2.18.5-1) ...
Setting up libjasper1 (1.900.1-6.1) ...
Setting up libnewt0.52 (0.52.10-5) ...
Setting up libpopt0 (1.15-1) ...
Setting up whiptail (0.52.10-5) ...
Setting up defoma (0.11.10-3) ...
Setting up fontconfig (2.6.0-4.2) ...
Updating font configuration of fontconfig...
Cleaning up category cid..
Cleaning up category truetype..
Cleaning up category type1..
Updating category type1..
Updating category truetype..
Updating category cid..
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
Setting up libpango1.0-common (1.26.2-1) ...
Cleaning up font configuration of pango...
Updating font configuration of pango...
Cleaning up category xfont..
Updating category xfont..
*** You don't have any defomized font packages.
*** So we are trying to force to generate pangox.aliases...
Setting up libdatrie1 (0.2.2-2) ...
Setting up libthai-data (0.1.12-2) ...
Setting up libthai0 (0.1.12-2) ...
Setting up libpango1.0-0 (1.26.2-1) ...
Setting up libxcomposite1 (1:0.4.1-1) ...
Setting up libxcursor1 (1:1.1.10-1) ...
Setting up libxinerama1 (2:1.0.3-2) ...
Setting up libxrandr2 (2:1.3.0-2) ...
Setting up shared-mime-info (0.70-1) ...
Setting up libgtk2.0-0 (2.18.5-1) ...
Setting up python-support (1.0.6) ...
Setting up uuid-dev (2.16.2-0) ...
Setting up zlib1g-dev (1:1.2.3.4.dfsg-2) ...
Setting up libexpat1-dev (2.0.1-6) ...
Setting up doxygen (1.6.1-1) ...
Setting up swig (1.3.40-2) ...
Setting up libidn11 (1.15-2) ...
Setting up libsasl2-2 (2.1.23.dfsg1-3) ...
Setting up libldap-2.4-2 (2.4.17-2.1) ...
Setting up libcurl3-gnutls (7.19.7-1) ...
Setting up emacsen-common (1.4.19) ...
emacsen-common: Handling install of emacsen flavor emacs
Setting up cmake-data (2.8.0-5) ...
emacsen-common: Handling install of emacsen flavor emacs
Setting up cmake (2.8.0-5) ...
Setting up x11proto-core-dev (7.0.16-1) ...
Setting up libxau-dev (1:1.0.5-1) ...
Setting up libxdmcp-dev (1:1.0.3-1) ...
Setting up x11proto-input-dev (1.5.0-2) ...
Setting up x11proto-kb-dev (1.0.4-1) ...
Setting up xtrans-dev (1.2.5-1) ...
Setting up libpthread-stubs0 (0.3-2) ...
Setting up libpthread-stubs0-dev (0.3-2) ...
Setting up libxcb1-dev (1.5-2) ...
Setting up libx11-dev (2:1.3.2-1) ...
Setting up mesa-common-dev (7.6.1~rc3-1) ...
Setting up libgl1-mesa-dev (7.6.1~rc3-1) ...
Setting up libglu1-mesa (7.6.1~rc3-1) ...
Setting up libglu1-mesa-dev (7.6.1~rc3-1) ...
Setting up libice-dev (2:1.0.6-1) ...
Setting up libsm-dev (2:1.1.1-1) ...
Setting up libxt-dev (1:1.0.7-1) ...
Setting up libfreetype6-dev (2.3.11-1) ...
Setting up x11proto-xext-dev (7.0.4-2) ...
Setting up libxext-dev (2:1.0.4-1) ...
Setting up x11proto-scrnsaver-dev (1.1.0.0-2) ...
Setting up libxss-dev (1:1.1.3-1) ...
Setting up pkg-config (0.22-1) ...
Setting up libfontconfig1-dev (2.6.0-4.2) ...
Setting up x11proto-render-dev (2:0.11-1) ...
Setting up libxrender-dev (1:0.9.5-1) ...
Setting up libxft-dev (2.1.14-1) ...
Setting up libpng12-dev (1.2.41-1) ...
Setting up libvtk5-dev (5.2.1-14) ...
Setting up tcl8.5 (8.5.8-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.8-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
Setting up python-vtk (5.2.1-14) ...
Setting up libjpeg62-dev (6b-15) ...
Setting up libtiffxx0c2 (3.9.2-1) ...
Setting up libtiff4-dev (3.9.2-1) ...
Setting up libopenjpeg-dev (1.3+dfsg-4) ...
Setting up libgd2-noxpm (2.0.36~rc1~dfsg-3.1) ...
Setting up libltdl7 (2.2.6b-2) ...
Setting up libgraphviz4 (2.20.2-6) ...
Setting up libxmu6 (2:1.0.5-1) ...
Setting up libxpm4 (1:3.5.8-1) ...
Setting up libxaw7 (2:1.0.7-1) ...
Setting up graphviz (2.20.2-6) ...
Setting up libpoppler5 (0.12.2-2) ...
Setting up libpoppler-dev (0.12.2-2) ...
Setting up libssl-dev (0.9.8k-7) ...
Setting up tex-common (2.03) ...

Creating config file /etc/texmf/texmf.d/05TeXMF.cnf with new version

Creating config file /etc/texmf/texmf.d/15Plain.cnf with new version

Creating config file /etc/texmf/texmf.d/45TeXinputs.cnf with new version

Creating config file /etc/texmf/texmf.d/55Fonts.cnf with new version

Creating config file /etc/texmf/texmf.d/65BibTeX.cnf with new version

Creating config file /etc/texmf/texmf.d/75DviPS.cnf with new version

Creating config file /etc/texmf/texmf.d/85Misc.cnf with new version

Creating config file /etc/texmf/texmf.d/90TeXDoc.cnf with new version

Creating config file /etc/texmf/texmf.d/95NonPath.cnf with new version

Creating config file /etc/texmf/updmap.d/00updmap.cfg with new version

Creating config file /etc/texmf/texmf.cnf with new version
Running mktexlsr. This may take some time... done.
texlive-base is not ready, delaying updmap-sys call
texlive-base is not ready, skipping fmtutil-sys --all call
Setting up texlive-common (2009-6) ...
Setting up texlive-doc-base (2009-2) ...
Setting up luatex (0.50.0-1) ...
texlive-base is not ready, cannot create formats
Setting up libkpathsea5 (2009-4) ...
Setting up texlive-binaries (2009-4) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode.
Building format(s) --refresh.
	This may take some time... done.
Setting up libcupsimage2 (1.4.2-5) ...
Setting up libpaper1 (1.1.23+nmu1) ...

Creating config file /etc/papersize with new version
Setting up libgs8 (8.70~dfsg-2+b2) ...
Setting up gsfonts (1:8.11+urwcyr1.0.7~pre44-4) ...
(Re-)registering PostScript fonts...
Updating fontconfig cache for /usr/share/fonts/type1/gsfonts
done.
Setting up libmono0 (2.4.3+dfsg-1) ...
Setting up libexif12 (0.6.19-1) ...
Setting up libgdiplus (2.4.2-1+b1) ...
Setting up libsqlite0 (2.8.17-6) ...
Setting up libglib2.0-dev (2.22.3-2) ...
Setting up libmono-dev (2.4.3+dfsg-1) ...
Setting up cli-common (0.7) ...
Setting up liburi-perl (1.50-1) ...
Setting up libhtml-tagset-perl (3.20-2) ...
Setting up libhtml-parser-perl (3.64-1) ...
Setting up libhtml-tree-perl (3.23-1) ...
Setting up netbase (4.40) ...
Setting up libwww-perl (5.834-1) ...
Setting up libxml-parser-perl (2.36-1.1+b1) ...
Setting up libxml-perl (0.08-1) ...
Setting up libxml-regexp-perl (0.03-7) ...
Setting up libxml-dom-perl (1.44-1) ...
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Setting up texlive-base (2009-6) ...
Running mktexlsr. This may take some time... done.
Building format(s) --all --cnffile /etc/texmf/fmt.d/10texlive-base.cnf.
	This may take some time... done.
Processing triggers for tex-common ...
Running updmap-sys. This may take some time... done.
Setting up texlive-extra-utils (2009-6) ...
Processing triggers for tex-common ...
Running mktexlsr. This may take some time... done.
Setting up openjdk-6-jre-lib (6b17~pre3-1) ...
Setting up gs-common (8.70~dfsg-2) ...
Setting up libmono-system2.0-cil (2.4.3+dfsg-1) ...
Setting up default-jre-headless (1.6-34) ...
Setting up ca-certificates-java (20091021) ...
creating /etc/ssl/certs/java/cacerts...
done.
Setting up openjdk-6-jre-headless (6b17~pre3-1) ...
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/java to provide /usr/bin/java (java) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/orbd to provide /usr/bin/orbd (orbd) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/servertool to provide /usr/bin/servertool (servertool) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/tnameserv to provide /usr/bin/tnameserv (tnameserv) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode.
Setting up libaccess-bridge-java (1.26.2-3) ...
Setting up libaccess-bridge-java-jni (1.26.2-3) ...
Setting up openjdk-6-jre (6b17~pre3-1) ...
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/javaws to provide /usr/bin/javaws (javaws) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/pluginappletviewer to provide /usr/bin/pluginappletviewer (pluginappletviewer) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/jre/bin/policytool to provide /usr/bin/policytool (policytool) in auto mode.
Setting up default-jre (1.6-34) ...
Setting up libvtk-java (5.2.1-14) ...
Setting up openjdk-6-jdk (6b17~pre3-1) ...
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/appletviewer to provide /usr/bin/appletviewer (appletviewer) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/apt to provide /usr/bin/apt (apt) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/extcheck to provide /usr/bin/extcheck (extcheck) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/idlj to provide /usr/bin/idlj (idlj) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jar to provide /usr/bin/jar (jar) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/javac to provide /usr/bin/javac (javac) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/javah to provide /usr/bin/javah (javah) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/javap to provide /usr/bin/javap (javap) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jhat to provide /usr/bin/jhat (jhat) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jps to provide /usr/bin/jps (jps) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jsadebugd to provide /usr/bin/jsadebugd (jsadebugd) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/native2ascii to provide /usr/bin/native2ascii (native2ascii) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/schemagen to provide /usr/bin/schemagen (schemagen) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/wsgen to provide /usr/bin/wsgen (wsgen) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/wsimport to provide /usr/bin/wsimport (wsimport) in auto mode.
update-alternatives: using /usr/lib/jvm/java-6-openjdk/bin/xjc to provide /usr/bin/xjc (xjc) in auto mode.
Setting up default-jdk (1.6-34) ...
Setting up ghostscript (8.70~dfsg-2+b2) ...
Updating font configuration of gs...
Cleaning up category psprint..
Cleaning up category cmap..
Cleaning up category cid..
Cleaning up category truetype..
Cleaning up category gsfontderivative..
Cleaning up category type3..
Cleaning up category type1..
Updating category type1..
Updating category type3..
Updating category gsfontderivative..
Updating category truetype..
Updating category cid..
Updating category cmap..
Updating category psprint..
Setting up libmono-security2.0-cil (2.4.3+dfsg-1) ...
Setting up mono-2.0-gac (2.4.3+dfsg-1) ...
Setting up mono-gac (2.4.3+dfsg-1) ...
* Installing 6 assemblies from libnunit2.4-cil into Mono
update-alternatives: using /usr/bin/gacutil to provide /usr/bin/cli-gacutil (global-assembly-cache-tool) in auto mode.
Setting up mono-runtime (2.4.3+dfsg-1) ...
update-alternatives: using /usr/bin/mono to provide /usr/bin/cli (cli) in auto mode.
Setting up libmono-corlib2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-corlib1.0-cil (2.4.3+dfsg-1) ...
Setting up mono-utils (2.4.3+dfsg-1) ...
update-alternatives: using /usr/bin/monodis to provide /usr/bin/cli-ildasm (cil-disassembler) in auto mode.
Setting up libmono-cecil-private-cil (2.4.3+dfsg-1) ...
Setting up libmono-getoptions2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-relaxng1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-security1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-data-tds2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-data2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-data-tds1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-data1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-web1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-runtime1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-peapi2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-posix2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-sharpzip2.84-cil (2.4.3+dfsg-1) ...
Setting up libmono-sqlite2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono2.0-cil (2.4.3+dfsg-1) ...
Setting up mono-gmcs (2.4.3+dfsg-1) ...
Setting up libmono-posix1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-sharpzip0.84-cil (2.4.3+dfsg-1) ...
Setting up libmono1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-getoptions1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-data1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-data2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-c5-1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-webbrowser0.5-cil (2.4.3+dfsg-1) ...
Setting up libmono-management2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-messaging2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-simd2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-i18n-west1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-i18n1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-i18n-west2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-i18n2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-messaging1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-messaging2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-ldap1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-ldap1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-ldap2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-ldap2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-accessibility1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-winforms1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-accessibility2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-cairo1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-cairo2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-sharpzip0.6-cil (2.4.3+dfsg-1) ...
Setting up libmono-sharpzip2.6-cil (2.4.3+dfsg-1) ...
Setting up libmono-npgsql1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-npgsql2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-bytefx0.7.6.1-cil (2.4.3+dfsg-1) ...
Setting up libmono-bytefx0.7.6.2-cil (2.4.3+dfsg-1) ...
Setting up libmono-db2-1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-oracle1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-oracle2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-sqlite1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-cscompmgd7.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-cscompmgd8.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-microsoft7.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-microsoft8.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-peapi1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-relaxng2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-web2.0-cil (2.4.3+dfsg-1) ...
Setting up mono-2.0-devel (2.4.3+dfsg-1) ...
Setting up libmono-system-runtime2.0-cil (2.4.3+dfsg-1) ...
Setting up libnunit2.4-cil (2.4.7+dfsg-4) ...
* Installing 6 assemblies from libnunit2.4-cil into Mono
Setting up libmono-nunit2.4-cil (2.4.3+dfsg-1) ...
Setting up libmono-system-web-mvc1.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-wcf3.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-winforms2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-microsoft-build2.0-cil (2.4.3+dfsg-1) ...
Setting up libmono-cil-dev (2.4.3+dfsg-1) ...
Setting up mono-devel (2.4.3+dfsg-1) ...
update-alternatives: using /usr/bin/mono-csc to provide /usr/bin/cli-csc (c-sharp-compiler) in auto mode.
update-alternatives: warning: skip creation of /usr/share/man/man1/cli-csc.1.gz because associated file /usr/share/man/man1/csc.1.gz (of link group c-sharp-compiler) doesn't exist.
update-alternatives: using /usr/bin/resgen to provide /usr/bin/cli-resgen (resource-file-generator) in auto mode.
update-alternatives: using /usr/bin/al to provide /usr/bin/cli-al (assembly-linker) in auto mode.
update-alternatives: using /usr/bin/sn to provide /usr/bin/cli-sn (strong-name-tool) in auto mode.
Setting up cli-common-dev (0.7) ...
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Processing triggers for python-support ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  fakeroot
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 0B/102kB of archives.
After this operation, 373kB of additional disk space will be used.
Selecting previously deselected package fakeroot.
(Reading database ... 29680 files and directories currently installed.)
Unpacking fakeroot (from .../fakeroot_1.14.4-1_armel.deb) ...
Processing triggers for man-db ...
Setting up fakeroot (1.14.4-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode.
Copying back the cached apt archive contents
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Copying source file
    -> copying [/media/usbstick/graphviz/gdcm_2.0.14-2.dsc]
    -> copying [/media/usbstick/graphviz/gdcm_2.0.14.orig.tar.gz]
    -> copying [/media/usbstick/graphviz/gdcm_2.0.14-2.diff.gz]
Extracting source
gpgv: keyblock resource `/tmp/buildd/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Mon Nov 16 11:38:55 2009 UTC using DSA key ID 0EA23F2B
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./gdcm_2.0.14-2.dsc
dpkg-source: info: extracting gdcm in gdcm-2.0.14
dpkg-source: info: unpacking gdcm_2.0.14.orig.tar.gz
dpkg-source: info: applying gdcm_2.0.14-2.diff.gz
 -> Building the package
dpkg-buildpackage: set CFLAGS to default value: -g -O2
dpkg-buildpackage: set CPPFLAGS to default value: 
dpkg-buildpackage: set LDFLAGS to default value: 
dpkg-buildpackage: set FFLAGS to default value: -g -O2
dpkg-buildpackage: set CXXFLAGS to default value: -g -O2
dpkg-buildpackage: source package gdcm
dpkg-buildpackage: source version 2.0.14-2
dpkg-buildpackage: source changed by Mathieu Malaterre <mathieu.malaterre at gmail.com>
dpkg-buildpackage: host architecture armel
 fakeroot debian/rules clean
QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null pop -a -R || test $? = 2 
No patch removed
rm -rf .pc debian/stamp-patched
dh_testdir
dh_testroot
rm -f debian/configure*stamp debian/build*stamp 
rm -rf debian/build*
dh_clean
 dpkg-source -b gdcm-2.0.14
dpkg-source: info: using source format `1.0'
dpkg-source: info: building gdcm using existing gdcm_2.0.14.orig.tar.gz
dpkg-source: info: building gdcm in gdcm_2.0.14-2.diff.gz
dpkg-source: info: building gdcm in gdcm_2.0.14-2.dsc
 debian/rules build
QUILT_PATCHES=debian/patches quilt --quiltrc /dev/null push -a || test $? = 2
Applying patch poppler_breaks_api.patch
patching file Applications/Cxx/gdcminfo.cxx
patching file Applications/Cxx/CMakeLists.txt

Applying patch cmake28_namelink.patch
patching file Source/DataDictionary/CMakeLists.txt
patching file Source/MediaStorageAndFileFormat/CMakeLists.txt
patching file Source/InformationObjectDefinition/CMakeLists.txt
patching file Source/Common/CMakeLists.txt
patching file Source/DataStructureAndEncodingDefinition/CMakeLists.txt
patching file Utilities/gdcmjpeg/12/CMakeLists.txt
patching file Utilities/gdcmjpeg/16/CMakeLists.txt
patching file Utilities/gdcmjpeg/8/CMakeLists.txt
patching file Utilities/VTK/CMakeLists.txt
patching file Utilities/gdcmcharls/CMakeLists.txt

Now at patch cmake28_namelink.patch
touch debian/stamp-patched
dh_testdir
[ -d /tmp/buildd/gdcm-2.0.14/debian/build-python2.5 ] || mkdir /tmp/buildd/gdcm-2.0.14/debian/build-python2.5
cd /tmp/buildd/gdcm-2.0.14/debian/build-python2.5 && cmake /tmp/buildd/gdcm-2.0.14 -DCMAKE_INSTALL_PREFIX="/usr" \
		-DCMAKE_SKIP_RPATH=ON \
		-DGDCM_NO_EXECUTABLE_PROPERTIES=ON \
		-DCMAKE_VERBOSE_MAKEFILE= \
		-DGDCM_BUILD_APPLICATIONS=ON \
		-DGDCM_DOCUMENTATION:BOOL=ON \
		-DGDCM_PDF_DOCUMENTATION:BOOL=OFF \
		-DGDCM_BUILD_SHARED_LIBS=ON \
		-DGDCM_WRAP_PYTHON=ON \
		-DGDCM_WRAP_CSHARP=1 \
		-DGDCM_WRAP_JAVA=ON \
		-DGMCS_EXECUTABLE:FILEPATH=/usr/bin/csc \
		-DDESIRED_CSHARP_COMPILER_VERSION=2 \
		-DGDCM_BUILD_TESTING:BOOL=OFF \
		-DCMAKE_BUILD_TYPE:STRING=Release \
		-DGDCM_USE_SYSTEM_EXPAT:BOOL=ON \
		-DGDCM_USE_SYSTEM_UUID:BOOL=ON \
		-DGDCM_USE_SYSTEM_ZLIB:BOOL=ON \
		-DGDCM_USE_SYSTEM_OPENJPEG:BOOL=ON \
		-DGDCM_USE_SYSTEM_OPENSSL:BOOL=ON \
		-DGDCM_USE_SYSTEM_POPPLER:BOOL=ON \
		-DGDCM_VTK_JAVA_JAR:FILEPATH=/usr/share/java/vtk.jar \
		-DGDCM_USE_VTK:BOOL=ON
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for inttypes.h
-- Looking for inttypes.h - found
-- Found POPPLER: /usr/lib/libpoppler.so
-- Found OPENJPEG: /usr/lib/libopenjpeg.so
-- Found ZLIB: /usr/lib/libz.so
-- Found OpenSSL: /usr/lib/libssl.so;/usr/lib/libcrypto.so
-- Found UUID: /usr/lib/libuuid.so
-- Found EXPAT: /usr/lib/libexpat.so
Will be using C# v2: /usr/bin/csc
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Found PythonLibs: /usr/lib/libpython2.5.so
-- Java version 1.6.0.0 configured successfully!
-- Found Java: /usr/lib/jvm/default-java/bin/java
-- Looking for stdlib.h
-- Looking for stdlib.h - found
-- Found Doxygen: /usr/bin/doxygen
-- Looking for include files HAVE_SYS_TIME_H
-- Looking for include files HAVE_SYS_TIME_H - found
-- Looking for include files HAVE_WINSOCK_H
-- Looking for include files HAVE_WINSOCK_H - not found.
-- Looking for include files HAVE_BYTESWAP_H
-- Looking for include files HAVE_BYTESWAP_H - found
-- Looking for rpc.h
-- Looking for rpc.h - not found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for strncasecmp
-- Looking for strncasecmp - found
-- Looking for snprintf
-- Looking for snprintf - found
-- Looking for _stricmp
-- Looking for _stricmp - not found
-- Looking for _strnicmp
-- Looking for _strnicmp - not found
-- Looking for _snprintf
-- Looking for _snprintf - not found
-- Looking for gettimeofday
-- Looking for gettimeofday - found
You are using the SWIG version of VTKGDCM. This is not compatible with Activiz
-- Java version 1.6.0.0 configured successfully!
Implicitely adding debian package layout...
CMake Error at Utilities/VTK/CMakeLists.txt:268 (message):
  Could not find vtk.jar file, VTK_JAVA_JAR is wrong, please set proper
  GDCM_VTK_JAVA_JAR replacement var


-- Configuring incomplete, errors occurred!
make: *** [debian/configure-python2.5-stamp] Error 1
dpkg-buildpackage: error: debian/rules build gave error exit status 2
pbuilder: Failed autobuilding of package
 -> Aborting with an error
 -> unmounting dev/pts filesystem
 -> unmounting proc filesystem
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