[Debian-med-packaging] biojava-live_1.6.1.svn.20090306-1_i386.changes is NEW

Debian Installer installer at ftp-master.debian.org
Mon Mar 9 13:17:05 UTC 2009

(new) biojava-live_1.6.1.svn.20090306-1.diff.gz optional contrib/science
(new) biojava-live_1.6.1.svn.20090306-1.dsc optional contrib/science
(new) biojava-live_1.6.1.svn.20090306.orig.tar.gz optional contrib/science
(new) libbiojava-java-demos_1.6.1.svn.20090306-1_all.deb optional contrib/science
Example programs for BioJava
 The package comes with a wealth of use cases for BioJava. It is generated
 together with the API documentation but because of its size of ~3.7MB it
 was decided to distribute it separately.
(new) libbiojava-java-doc_1.6.1.svn.20090306-1_all.deb optional contrib/doc
[Biology] Documentation for BioJava
 JavaDoc generated HTML files describing the API.
(new) libbiojava-java_1.6.1.svn.20090306-1_all.deb optional contrib/science
Java API to biological data and applications
 BioJava is an open-source project dedicated to providing a Java framework
 for processing biological data. It includes objects for manipulating
 sequences, file parsers, DAS client and server support, access to BioSQL
 and Ensembl databases, and powerful analysis and statistical routines
 including a dynamic programming toolkit.
 BioJava is provided by a vibrant community which meets annually at
 the Bioinformatics Open Source Conference (BOSC) that traditionally
 accompanies the Intelligent Systems in Molecular Biology (ISMB)
 meeting. Much like BioPerl, the employment of this library is valuable
 for everybody active in the field because of the many tricks of the
 trade one learns just by communicating on the mailing list.
 If using BioJava, please cite: R.C.G. Holland, T. Down, M. Pocock,
 A. Prlić, D. Huen, K. James, S. Foisy, A. Dräger, A. Yates,
 M. Heuer; M.J. Schreiber (2008) "BioJava: an Open-Source Framework
 for Bioinformatics" Bioinformatics 24(18):2096-2097.
(new) libbiojava1.6-java_1.6.1.svn.20090306-1_all.deb optional contrib/science
Java API to biological data and applications
 This package presents the Open Source Java API to biological databases
 and a series of mostly sequence-based algorithms. The APIs are not
 compatible between versions. In analogy to the dealing with shared
 libraries of the C language, the jar file of this package has the
 API version in its name. It is symbolically linked to the expected
 biojava.jar filename in the package libbiojava-java. This will help
 keeping multiple versions of the biojava API in parallel.
Changes: biojava-live (1.6.1.svn.20090306-1) experimental; urgency=low
  [ Andreas Tille ]
  * Initial release (Closes:#491025).
  [ Steffen Moeller ]
  * Added dependency to quilt.
  * Moved -doc to section doc.
  * Added symlinks to jar file with pseudo-soname
  * Need to be placed in contrib section as a start because of dependency
    to libjgrapht that is still in contrib.

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Announcing to debian-devel-changes at lists.debian.org
Closing bugs: 491025 

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