[Debian-med-packaging] Bug#533995: Bug#533995: Bug#533995: libtfbs-perl: FTBFS: tests failed

[gregor herrmann]

tag 533995 + patch
thanks

On Mon, 22 Jun 2009 20:23:38 +0900, Charles Plessy wrote:

> > I gave it another try on another machine with a slightly different
> > config, and now the test simply blocks:
> > make[2]: Leaving directory `/tmp/libtfbs-perl-0.5.svn.20080722/Ext'
> > PERL_DL_NONLAZY=1 /usr/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
> > t/01_Matrix..............Name "PDL::SHARE" used only once: possible typo at /usr/lib/perl/5.10/DynaLoader.pm line 219, <DATA> line 206.
> > t/01_Matrix..............ok                                                  
> > t/02_Search..............Name "PDL::SHARE" used only once: possible typo at /usr/lib/perl/5.10/DynaLoader.pm line 219, <DATA> line 206.
> > t/02_Search..............ok                                                  
> > t/03_DB_FlatFileDir......Name "PDL::SHARE" used only once: possible typo at /usr/lib/perl/5.10/DynaLoader.pm line 219, <DATA> line 206.
> > t/03_DB_FlatFileDir......ok                                                  
> > t/04_DB_TRANSFAC.........Name "PDL::SHARE" used only once: possible typo at /usr/lib/perl/5.10/DynaLoader.pm line 219, <DATA> line 206.
> > [BLOCKS HERE]
> 
> I figured out it is also a problem of network access. The test uses
> /TFBS/DB/TRANSFAC.pm, which connects to
> http://www.cbil.upenn.edu/cgi-bin/tess/tess33 for accessing a (proprietary)
> database. More details in
> http://www.ii.uib.no/svn/lenhard/TFBS/TFBS/DB/TRANSFAC.pm
> 
> I will discuss the issue with Upstream.

Hi Charles,

find attached a patch that fixes the build-without-network problem;
I'm not sure if there are other issues ...

Cheers,
gregor 
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