[Debian-med-packaging] Bug#549427: samtools 0.1.6~dfsg-1 FTBFS on sparc: bus error

[Andreas Barth]

Package: samtools
Version: 0.1.6~dfsg-1
Severity: serious

Hi,

this package FTBFS on sparc:

/usr/bin/make  -C . CFLAGS="-g -O2 -g -Wall -O2 -fPIC" CXXFLAGS="-g -O2 -g -Wall -O2" CPPFLAGS="" LDFLAGS=""  -C examples all
make[1]: Entering directory `/build/buildd-samtools_0.1.6~dfsg-1-sparc-aGfAkY/samtools-0.1.6~dfsg/examples'
../samtools faidx ex1.fa
../samtools import ex1.fa.fai ex1.sam.gz ex1.bam
[sam_header_read2] 2 sequences loaded.
make[1]: *** [ex1.bam] Bus error
make[1]: *** Deleting file `ex1.bam'
make[1]: Leaving directory `/build/buildd-samtools_0.1.6~dfsg-1-sparc-aGfAkY/samtools-0.1.6~dfsg/examples'
make: *** [debian/stamp-makefile-check] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2

Please see
https://buildd.debian.org/fetch.cgi?&pkg=samtools&ver=0.1.6%7Edfsg-1&arch=sparc&stamp=1254564365&file=log
for the ful build log.


Cheers,
Andi