[Debian-med-packaging] Bug#579239: libbio-scf-perl - FTBFS: #error Neither BIG nor LITTLE endian defined

[Bastian Blank]

tag 579239 patch
thanks

On Mon, Apr 26, 2010 at 11:50:52PM +0900, Charles Plessy wrote:
> Le Mon, Apr 26, 2010 at 02:42:17PM +0200, Bastian Blank a écrit :
> > Endianess is always defined in <endian.h>.

Patch.

diff -Nru staden-io-lib-1.12.2/debian/changelog staden-io-lib-1.12.2/debian/changelog
--- staden-io-lib-1.12.2/debian/changelog	2010-04-27 16:54:18.000000000 +0000
+++ staden-io-lib-1.12.2/debian/changelog	2010-04-27 16:54:18.000000000 +0000
@@ -1,3 +1,10 @@
+staden-io-lib (1.12.2-1.1) UNRELEASED; urgency=low
+
+  * Non-maintainer upload.
+  * Fix endianess detection. (closes: #579239)
+
+ -- Bastian Blank <waldi at debian.org>  Tue, 27 Apr 2010 09:12:09 +0000
+
 staden-io-lib (1.12.2-1) unstable; urgency=low
 
   * New upstream release: extra options in srf2fastq and API changes in
diff -Nru staden-io-lib-1.12.2/io_lib/os.h staden-io-lib-1.12.2/io_lib/os.h
--- staden-io-lib-1.12.2/io_lib/os.h	2009-09-15 13:29:23.000000000 +0000
+++ staden-io-lib-1.12.2/io_lib/os.h	2010-04-27 16:54:18.000000000 +0000
@@ -189,91 +189,19 @@
 /*
  *-----------------------------------------------------------------------------
  * Machine endianness.
- * These are overridden at the end when using autoconf, but are here for
- * when being built as part of the Staden Package.
  *-----------------------------------------------------------------------------
  */
 
-/*
- * First guess via autoconf. This is here as endianness can only be computed
- * by autoconf for the machine we're building on. Hence cross-compilations
- * or MacOSX "fat binaries" cannot work via autoconf in this manner.
- *
- * These provide a default for when the machine specific ifdefs below do you
- * catch your system type.
- */
-#ifdef HAVE_CONFIG_H
-#    if defined(WORDS_BIGENDIAN)
-#        ifdef SP_LITTLE_ENDIAN
-#            undef SP_LITTLE_ENDIAN
-#        endif
-#        define SP_BIG_ENDIAN
-#    else
-#        ifdef SP_BIG_ENDIAN
-#            undef SP_BIG_ENDIAN
-#        endif
-#        define SP_LITTLE_ENDIAN
-#    endif
-#endif
-
-/*
- * x86 equivalents
- */
-#if defined(__i386__) || defined(__i386) || defined(__amd64__) || defined(__amd64)
-#  if defined(SP_BIG_ENDIAN)
-#    undef SP_BIG_ENDIAN
-#  endif
-#  define SP_LITTLE_ENDIAN
-#endif
-
-/*
- * DEC Alpha
- */
-#if defined(__alpha__) || defined(__alpha)
-#  if defined(SP_LITTLE_ENDIAN)
-#    undef SP_LITTLE_ENDIAN
-#  endif
-#  define SP_BIG_ENDIAN
-#endif
-
-/*
- * SUN Sparc
- */
-#if defined(__sparc__) || defined(__sparc)
-#  if defined(SP_LITTLE_ENDIAN)
-#    undef SP_LITTLE_ENDIAN
-#  endif
-#  define SP_BIG_ENDIAN
-#endif
+#include <endian.h>
 
-/*
- * PowerPC
- */
-#if defined(__ppc__) || defined(__ppc)
-#  if defined(SP_LITTLE_ENDIAN)
-#    undef SP_LITTLE_ENDIAN
-#  endif
-#  define SP_BIG_ENDIAN
-#endif
-
-/* Some catch-alls */
-#if defined(__LITTLE_ENDIAN__) || defined(__LITTLEENDIAN__)
+#if __BYTE_ORDER == __LITTLE_ENDIAN
 #    define SP_LITTLE_ENDIAN
-#endif
-
-#if defined(__BIG_ENDIAN__) || defined(__BIGENDIAN__)
+#elif __BYTE_ORDER == __BIG_ENDIAN
 #    define SP_BIG_ENDIAN
+#else
+#    error Unknown endianess
 #endif
 
-#if defined(SP_BIG_ENDIAN) && defined(SP_LITTLE_ENDIAN)
-#    error Both BIG and LITTLE endian defined. Fix os.h and/or Makefile
-#endif
-
-#if !defined(SP_BIG_ENDIAN) && !defined(SP_LITTLE_ENDIAN)
-#    error Neither BIG nor LITTLE endian defined. Fix os.h and/or Makefile
-#endif
-
-
 /*
  *-----------------------------------------------------------------------------
  * Typedefs for data sizes. Note there's umpteen versions of typedefs here

-- 
Phasers locked on target, Captain.