[Debian-med-packaging] IGV package in git

[Shaun Jackman]

IGV 1.5.01 is in git. Any testers?
git+ssh://alioth.debian.org/git/debian-med/igv.git

Cheers,
Shaun

On 24 June 2010 18:06, Shaun Jackman <sjackman at gmail.com> wrote:
> Hi,
>
> IGV is in git and builds a working deb. I'd appreciate anyone that
> would like to give it a spin. You'll need to build and install
> picard-tools, also in git, as libsam-java (a binary built by
> picard-tools) is a dependency of IGV.
>
> Please read over debian/copyright. I'd like to know whether folk think
> it's in a state where IGV could be distributed in the non-free
> archive.
>
> Cheers,
> Shaun
>
> On 15 June 2010 18:12, Shaun Jackman <sjackman at gmail.com> wrote:
>> Hi all,
>>
>> I've packaged IGV for Debian and pushed the work to git:
>> git+ssh://alioth.debian.org/git/debian-med/igv.git
>>
>> It's a work in progress. These dependencies are still unresolved:
>> colt.jar        http://acs.lbl.gov/software/colt/
>> jide-*.jar      http://www.jidesoft.com/
>> jlfgr-1_0.jar   http://java.sun.com/developer/techDocs/hi/repository/
>> ledatastream.jar        http://mindprod.com/products1.html#LEDATASTREAM
>> maf.jar http://www.broadinstitute.org/genome_bio/siphy/
>>
>> I'd very much appreciate the help of anyone who would like to help
>> contribute to this project.
>>
>> Cheers,
>> Shaun
>