[Debian-med-packaging] [SCM] picard-tools branch, master, updated. upstream/1.24-15-g2916d9f

[Charles Plessy]

The following commit has been merged in the master branch:
commit 2423a083bc28a24e9e83cffa8cc834a7e192620c
Author: Charles Plessy <plessy at debian.org>
Date:   Tue Jul 6 16:14:51 2010 +0900

    Added a DEP-3 header to the Debian patch.
    
    http://dep.debian.net/deps/dep3/

diff --git a/debian/patches/01-build.xml b/debian/patches/01-build.xml
index 4a4c077..4c59e1b 100644
--- a/debian/patches/01-build.xml
+++ b/debian/patches/01-build.xml
@@ -1,3 +1,10 @@
+Description: Modifies the upstream build system.
+ This patch changes the path to the javac compiler, enables the use
+ of the system's testng library, and adds a new target for preparing
+ the sam and picard jar files and installing the extra R scripts
+ from src/scripts/net/sf/picard/analysis/.
+Origin: vendor
+Forwarded: no
 --- picard-tools-1.24.orig/build.xml
 +++ picard-tools-1.24/build.xml
 @@ -23,7 +23,7 @@

-- 
manipulate SAM and BAM files