[Debian-med-packaging] Fwd: acedb_4.9.39-2_amd64.changes is NEW
Steffen Möller
steffen_moeller at gmx.de
Tue Jul 13 09:47:03 UTC 2010
Dear FTPmaster team,
I just received the confirmation of this re-upload to have worked and
thought I should give also some more verbose ping about it. The ACEDB
was extremely state-of-the-artish in the late 90s and I must admit that
I have not heard too much about it any more. That is why I only
addressed the packaging of three much known programs that were once
developed alongside with that DB (for the genome of the C elegans wurm)
and that are still in use today.
I seeked help from our community, CCed, which did not have much to
comment on, my own extra scrutiny improved the copyright further and
also helps with the updating of all the email addresses across this
decade. The two RFCs have been removed, thank you for pointing this out,
man pages have been added.
Many greetings
Steffen
-------- Original Message --------
Subject: acedb_4.9.39-2_amd64.changes is NEW
Date: Mon, 12 Jul 2010 22:32:24 +0000
From: Archive Administrator <installer at ftp-master.debian.org>
To: Steffen Moeller <moeller at debian.org>
(new) acedb-other-belvu_4.9.39-2_amd64.deb extra science
multiple sequence alignment editor
For the analysis of biological sequences, a general principle is to
corresponding regions between related proteins, RNA or DNA. Written
next to each other, corresponding positions above each other, one has
prepared an alignment.
.
Belvu is best known for its perfect implementation of the Stockholm
format of multiple sequence alignments, since upstream is maintaining
that. That is for instance used in the Pfam and Rfam databases.
(new) acedb-other-dotter_4.9.39-2_amd64.deb extra science
visualisation of sequence similarity
For the analysis of biological sequences, a general principle is to
corresponding regions between related proteins, RNA or DNA.
.
Dotter displays graphically the similarity of DNA or protein sequence
to itself or another sequence.
(new) acedb-other_4.9.39-2_amd64.deb extra science
retrieval of DNA or protein sequences
This package collects all those smallish applications that acedb collects
under its 'other' target of its Makefile.
.
efetch: presumably short for 'entry fetch' collects sequence information
from common DNA and protein databases.
(new) acedb_4.9.39-2.diff.gz extra science
(new) acedb_4.9.39-2.dsc extra science
(new) acedb_4.9.39.orig.tar.gz extra science
Changes: acedb (4.9.39-2) unstable; urgency=low
.
* Cleanups in debian/copyright reaction to previous
rejection (Closes: #542068)
* Completed man pages
- by adding --help as an acceptable argument
- with the help of help2man and some
- considerable manual editing
Override entries for your package:
Announcing to debian-devel-changes at lists.debian.org
Closing bugs: 542068
Your package contains new components which requires manual editing of
the override file. It is ok otherwise, so please be patient. New
packages are usually added to the override file about once a week.
You may have gotten the distribution wrong. You'll get warnings above
if files already exist in other distributions.
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