[Debian-med-packaging] [SCM] Processing of sequence alignments in SAM and BAM formats. branch, master, updated. upstream/0.1.8-20-gcefa180

[Charles Plessy]

The following commit has been merged in the master branch:
commit 049705238f6c2d4cdd79022e7bcf2cc7d83ba9c7
Author: Charles Plessy <plessy at debian.org>
Date:   Wed Jul 14 14:04:08 2010 +0900

    Copied from SVN revision 4710 and adapted to Git.

diff --git a/debian/upstream-metadata.yaml b/debian/upstream-metadata.yaml
index 849bb5c..572f854 100644
--- a/debian/upstream-metadata.yaml
+++ b/debian/upstream-metadata.yaml
@@ -1,17 +1,19 @@
+Archive: SourceForge
 DOI: 10.1093/bioinformatics/btp352
 Homepage: http://samtools.sourceforge.net
+mr:
+  checkout: debcheckout -a git://git.debian.org/debian-med/samtools.git
+Name: SAM tools
 PMID: 19505943
-Reference: |
- @article{HengLi06082009,
- author = {Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard and 1000 Genome Project Data Processing Subgroup,  },
- title = {{The Sequence Alignment/Map (SAM) Format and SAMtools}},
- journal = {Bioinformatics},
- volume = {},
- number = {},
- pages = {btp352},
- doi = {10.1093/bioinformatics/btp352},
- year = {2009},
- URL = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btp352v1},
- eprint = {http://bioinformatics.oxfordjournals.org/cgi/reprint/btp352v1.pdf}
- }
+Reference: 
+ author: Li, Heng and Handsaker, Bob and Wysoker, Alec and Fennell, Tim and Ruan, Jue and Homer, Nils and Marth, Gabor and Abecasis, Goncalo and Durbin, Richard and 1000 Genome Project Data Processing Subgroup
+ title: The Sequence Alignment/Map (SAM) Format and SAMtools
+ journal: Bioinformatics
+ volume: 25
+ number: 16
+ pages: 2078-2079
+ doi: 10.1093/bioinformatics/btp352
+ year: 2009
+ URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btp352v1
+ eprint: http://bioinformatics.oxfordjournals.org/cgi/reprint/btp352v1.pdf
 Repository: https://samtools.svn.sourceforge.net/svnroot/samtools

-- 
Processing of sequence alignments in SAM and BAM formats.