[Debian-med-packaging] [SCM] igv branch, master, updated. upstream/1.4.2-4-gbfffebb
Shaun Jackman
sjackman at debian.org
Wed Jun 16 18:26:28 UTC 2010
The following commit has been merged in the master branch:
commit bfffebbd5a9fd9345b84bc7c0c4c7dd860bb8dcb
Author: Shaun Jackman <sjackman at debian.org>
Date: Wed Jun 16 11:23:17 2010 -0700
* src/org/broad/igv/h5/HDF5LocalWriter.java: Remove an unnecessary
call to H5.J2C.
diff --git a/debian/patches/debian-changes-1.4.2-1 b/debian/patches/debian-changes-1.4.2-1
index be66106..e3bc352 100644
--- a/debian/patches/debian-changes-1.4.2-1
+++ b/debian/patches/debian-changes-1.4.2-1
@@ -68,6 +68,17 @@ Last-Update: <YYYY-MM-DD>
</path>
<pathconvert property="class-path" pathsep=" " dirsep="/" refid="@jars">
+--- igv-1.4.2.orig/src/org/broad/igv/h5/HDF5LocalWriter.java
++++ igv-1.4.2/src/org/broad/igv/h5/HDF5LocalWriter.java
+@@ -491,7 +491,7 @@ public class HDF5LocalWriter implements
+ buf =
+ new double[]{((Number) value).doubleValue()};
+ } else {
+- dataType = H5.H5Tcopy(H5.J2C(HDF5Constants.H5T_C_S1));
++ dataType = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
+ buf =
+ value.toString().getBytes();
+ H5.H5Tset_size(dataType, ((byte[]) buf).length);
--- igv-1.4.2.orig/src/org/broad/igv/ui/util/GenericUtilities.java
+++ igv-1.4.2/src/org/broad/igv/ui/util/GenericUtilities.java
@@ -27,7 +27,7 @@ package org.broad.igv.ui.util;
--
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