[Debian-med-packaging] pynast_1.1-4_amd64.changes is NEW

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(new) pynast_1.1-4.debian.tar.gz extra python
(new) pynast_1.1-4.dsc extra python
(new) pynast_1.1-4_all.deb extra python
alignment of short DNA sequences
 The package provices a reimplementation of the Nearest Alignment
 Space Termination tool in python. It was prepared for next generation
 sequencers.
 .
 Given a set of sequences and a template alignment, PyNAST will align the
 input sequences against the template alignment, and return a multiple
 sequence alignment which contains the same number of positions (or
 columns) as the template alignment. This facilitates the analysis of new
 sequences in the context of existing alignments, and additional data
 derived from existing alignments such as phylogenetic trees. Because
 any protein or nucleic acid sequences and template alignments can be
 provided, PyNAST is not limited to the analysis of 16s rDNA sequences.
 .
 Since version 1.1, PyNAST no longer exactly matches the output
 of the origianl NAST program. Instead it focuses on getting better
 alignments. Users who wish to exactly match the results of NAST should
 download PyNAST 1.0.
 .
 PyNAST: a flexible tool for aligning sequences to a template
 alignment. J. Gregory Caporaso, Kyle Bittinger, Frederic D. Bushman,
 Todd Z. DeSantis, Gary L. Andersen, and Rob Knight. January 15, 2010,
 DOI 10.1093/bioinformatics/btp636. Bioinformatics 26: 266-267.
(new) pynast_1.1.orig.tar.gz extra python
Changes: pynast (1.1-4) unstable; urgency=low
 .
  * Moving pynast from contrib to main. The dependency cogent
    got its non-freeness resolved.
  * Changing name from python-pynast to pynast.


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