[Debian-med-packaging] cufflinks_1.2.1-1_amd64.changes is NEW

[Debian FTP Masters]

(new) cufflinks_1.2.1-1.debian.tar.gz optional non-free/science
(new) cufflinks_1.2.1-1.dsc optional non-free/science
(new) cufflinks_1.2.1-1_amd64.deb optional non-free/science
Transcript assembly, differential expression and regulation for RNA-Seq
 Cufflinks assembles transcripts, estimates their abundances, and tests for
 differential expression and regulation in RNA-Seq samples. It accepts aligned
 RNA-Seq reads and assembles the alignments into a parsimonious set of
 transcripts. Cufflinks then estimates the relative abundances of these
 transcripts based on how many reads support each one.
(new) cufflinks_1.2.1.orig.tar.gz optional non-free/science
Changes: cufflinks (1.2.1-1) unstable; urgency=low
 .
  [ Alexandre Mestiashvili ]
  * New upstream release
  * added patch to fix bam.h location .
  * debian/rules invoke autoreconf
  * debian/rules added overrides for dh_auto_clean and dh_clean
  * added missing dependency - quilt .We use dh_quilt_patch,
    dh_quilt_unpatch helpers
  * debian/control added dependency python (>=2.6.6-3~) for source package
  * debian/control added dependency python (>=2.6.6-3~) for binary package
 .
  [ Andreas Tille ]
  * Added myself to uploaders
  * Debhelper 8 (control+compat)
  * debian/watch: removed dh-make template from watch file
  * debian/rules: invoke autotools_dev
 .
  [ Charles Plessy ]
  * Switch to non-free section because of the locfit license (debian/control).
  * Added myself to Uploaders (debian/control).
  * Compress binary package with xz (debian/rules).
  * Pre-depend on dpkg (>= 1.15.6) for xz compression (Ubuntu LTS).
 .
cufflinks (1.0.3-1) UNRELEASED; urgency=low
 .
  [ Alex Mestiashvili ]
  * added docs
  * added missing dependency
  * libbam-dev provides necessary headers only from 0.1.16 version .
    Fixed in control file.
 .
  [ Charles Plessy ]
  * Add debian/gbp.conf to show the package is managed with git-buildpackage.
  * Converted Debian copyright file to machine-readable format (DEP 5).
  * Reviewed copyright and license notices, and found that locfit is non-free…
 .
  [ Alex Mestiashvili ]
  * Imported Upstream version 1.0.3 (bugfix)
 .
cufflinks (1.0.2-1) UNRELEASED; urgency=low
 .
  * Initial release (Closes: #627799)


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