[Debian-med-packaging] Bug#658833: biomaj: Missing file for console help

[Olivier Sallou]

Package: biomaj
Version: 1.2.0-3
Severity: normal

The package does not include file console_help.txt. This file is used by the program
 to display default help and --help parameter.
The result is help console is not available

-- System Information:
Debian Release: wheezy/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.32-5-amd64 (SMP w/1 CPU core)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

Versions of packages biomaj depends on:
ii  ant                      1.8.2-4         Java based build tool like make
ii  ant-contrib              1.0~b3+svn177-4 collection of tasks, types and oth
ii  ant-optional             1.8.2-4         Java based build tool like make - 
ii  debconf [debconf-2.0]    1.5.41          Debian configuration management sy
ii  default-jdk              1:1.6-46        Standard Java or Java compatible D
ii  junit4                   4.8.2-2         JUnit regression test framework fo
ii  libcommons-cli-java      1.2-3           API for working with the command l
ii  libcommons-codec-java    1.5-1           encoder and decoders such as Base6
ii  libcommons-dbcp-java     1.4-2           Database Connection Pooling Servic
ii  libcommons-httpclient-ja 3.1-10          A Java(TM) library for creating HT
ii  libcommons-logging-java  1.1.1-8         commmon wrapper interface for seve
ii  libcommons-net2-java     2.2-1           internet protocol suite Java libra
ii  libcommons-pool-java     1.5.6-1         pooling implementation for Java ob
ii  libgnujaf-java           1.1.1-7         free implementation of the javabea
ii  libgnumail-java          1.1.2-6         free implementation of the javamai
ii  libhsqldb-java           1.8.0.10-11     Java SQL database engine
ii  libjcommon-java          1.0.16-2        General Purpose library for Java
ii  libjdom1-java            1.1.2+dfsg-2    lightweight and fast library using
ii  libjets3t-java           0.8.1+dfsg-1    Java interface to Amazon S3 and Cl
ii  libjgoodies-forms-java   1.3.0-2         Framework to lay out and implement
ii  libjsch-java             0.1.42-2        pure Java implementation of the SS
ii  liblog4j1.2-java         1.2.16-3        Logging library for java
ii  libmysql-java            5.1.16-2        Java database (JDBC) driver for My
ii  liboro-java              2.0.8a-8        Regular expression library for Jav
ii  libregexp-java           1.5-3           Regular expression library for Jav
ii  libsaxonb-java           9.1.0.8-1       The Saxon-B XSLT Processor
ii  mysql-server             5.1.58-1        MySQL database server (metapackage
ii  mysql-server-5.1 [mysql- 5.1.58-1        MySQL database server binaries and
ii  openjdk-6-jdk            6b23~pre9-1     OpenJDK Development Kit (JDK)
ii  perl                     5.12.4-6        Larry Wall's Practical Extraction 
ii  sun-java6-jdk            6.26-3          Sun Java(TM) Development Kit (JDK)

biomaj recommends no packages.

Versions of packages biomaj suggests:
ii  blast2               1:2.2.25.20110713-3 Basic Local Alignment Search Tool
pn  ncbi-tools-bin       <none>              (no description available)

-- Configuration Files:
/etc/biomaj/db_properties/admin/alu.properties changed [not included]
/etc/biomaj/db_properties/admin/sts.properties changed [not included]
/etc/biomaj/db_properties/global.properties changed [not included]

-- debconf information excluded