[Debian-med-packaging] Bug#655785: gofigure2: FTBFS: libITKIO.so: undefined reference to `gdcm::PixmapToPixmapFilter::SetInput(gdcm::Pixmap const&)'

[Lucas Nussbaum]

Source: gofigure2
Version: 0.9.0-1
Severity: serious
Tags: wheezy sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20120112 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part:
> /usr/bin/c++    -fopenmp  -Wno-deprecated  -ftemplate-depth-50 -Wall -Wno-deprecated -O2 -g      CMakeFiles/gofigure.dir/gofigure.cxx.o CMakeFiles/gofigure.dir/QGoTabManager.cxx.o CMakeFiles/gofigure.dir/QGoMainWindow.cxx.o CMakeFiles/gofigure.dir/QGoPluginManager.cxx.o CMakeFiles/gofigure.dir/__/Interfaces/QGoPluginHelper.cxx.o CMakeFiles/gofigure.dir/__/Interfaces/QGoPlugin.cxx.o CMakeFiles/gofigure.dir/__/Interfaces/QGoImageFilterPluginBase.cxx.o CMakeFiles/gofigure.dir/moc_QGoTabManager.cxx.o CMakeFiles/gofigure.dir/moc_QGoMainWindow.cxx.o CMakeFiles/gofigure.dir/moc_QGoPluginManager.cxx.o CMakeFiles/gofigure.dir/__/Interfaces/moc_QGoPlugin.cxx.o CMakeFiles/gofigure.dir/__/Interfaces/moc_QGoImageFilterPluginBase.cxx.o CMakeFiles/gofigure.dir/qrc_axes.cxx.o  -o ../bin/gofigure -rdynamic -L/usr/lib/InsightToolkit -L/tmp/buildd/gdcm-2.0.19/obj-x86_64-linux-gnu/bin/. -L/build/gofigure2-NEbRGe/gofigure2-0.9.0/obj-x86_64-linux-gnu/bin -L/build/gofigure2-NEbRGe/gofigure2-0.9.0/obj-x86_64-linux-gnu/lib ../lib/libQGoGui.so.0.9 ../lib/libQGoIO.so.0.9 ../lib/libitkQt.so.0.9 -lboost_program_options-mt ../lib/libvtkLSMReader.so.0.9 -lITKAlgorithms -lITKNumerics -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads -lITKStatistics -litkNetlibSlatec -lITKFEM -lITKBasicFilters -lITKIO -lITKNrrdIO /usr/lib/libgdcmMSFF.so.2.0.19 /usr/lib/libgdcmDICT.so.2.0.19 /usr/lib/libgdcmIOD.so.2.0.19 /usr/lib/libgdcmDSED.so.2.0.19 /usr/lib/libgdcmCommon.so.2.0.19 -litkjpeg8 -lpng -ltiff -lITKSpatialObject -lITKMetaIO -lITKDICOMParser -lITKEXPAT -lITKniftiio -lITKznz -lz -lITKTransformIOReview -lITKQuadEdgeMesh -lITKCommon -litkvnl_inst -litkvnl_algo -litkv3p_netlib -litkvnl -litkvcl -litkv3p_lsqr -lm -litksys -lpthread /usr/lib/libQVTK.so.5.8.0 /usr/lib/libvtkViews.so.5.8.0 /usr/lib/libvtkInfovis.so.5.8.0 /usr/lib/libvtkQtChart.so.5.8.0 -lQtSql -lQtNetwork ../lib/libvtkRenderingAddOn2.so.0.9 /usr/lib/libvtkWidgets.so.5.8.0 /usr/lib/libvtkVolumeRendering.so.5.8.0 ../lib/libPoissonReconstruction.so.0.9 /usr/lib/libvtkHybrid.so.5.8.0 /usr/lib/libvtkParallel.so.5.8.0 /usr/lib/libvtkRendering.so.5.8.0 /usr/lib/libvtkIO.so.5.8.0 /usr/lib/libvtkImaging.so.5.8.0 /usr/lib/libvtkGraphics.so.5.8.0 /usr/lib/libvtkFiltering.so.5.8.0 /usr/lib/libvtkCommon.so.5.8.0 -lm /usr/lib/libvtksys.so.5.8.0 -ldl ../lib/libctk.so.0.9 -lQtGui -lQtCore -Wl,-rpath,/usr/lib/InsightToolkit:/tmp/buildd/gdcm-2.0.19/obj-x86_64-linux-gnu/bin/.:/build/gofigure2-NEbRGe/gofigure2-0.9.0/obj-x86_64-linux-gnu/bin:/build/gofigure2-NEbRGe/gofigure2-0.9.0/obj-x86_64-linux-gnu/lib: 
> /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../../lib/libITKIO.so: undefined reference to `gdcm::PixmapToPixmapFilter::SetInput(gdcm::Pixmap const&)'
> collect2: ld returned 1 exit status

The full build log is available from:
   http://people.debian.org/~lucas/logs/2012/01/12/gofigure2_0.9.0-1_lsid64.buildlog

A list of current common problems and possible solutions is available at 
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on about 50 AMD64 nodes
of the Grid'5000 platform, using a clean chroot.  Internet was not
accessible from the build systems.