[Debian-med-packaging] fasttree_2.1.4-1_amd64.changes is NEW
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(new) fasttree_2.1.4-1.debian.tar.gz extra science
(new) fasttree_2.1.4-1.dsc extra science
(new) fasttree_2.1.4-1_amd64.deb extra science
phylogenetic trees from alignments of nucleotide or protein sequences
FastTree infers approximately-maximum-likelihood phylogenetic trees from
alignments of nucleotide or protein sequences. It handles alignments
with up to a million of sequences in a reasonable amount of time and
memory. For large alignments, FastTree is 100-1,000 times faster than
PhyML 3.0 or RAxML 7.
.
FastTree is more accurate than PhyML 3 with default settings, and much
more accurate than the distance-matrix methods that are traditionally
used for large alignments. FastTree uses the Jukes-Cantor or generalized
time-reversible (GTR) models of nucleotide evolution and the JTT
(Jones-Taylor-Thornton 1992) model of amino acid evolution. To account
for the varying rates of evolution across sites, FastTree uses a single
rate for each site (the "CAT" approximation). To quickly estimate the
reliability of each split in the tree, FastTree computes local support
values with the Shimodaira-Hasegawa test (these are the same as PhyML 3's
"SH-like local supports").
.
This package contains a single threaded version (fasttree) and a
parallel version which uses OpenMP (fasttreMP).
(new) fasttree_2.1.4.orig.tar.gz extra science
Changes:
fasttree (2.1.4-1) unstable; urgency=low
.
* Initial release (Closes: #677648)
Override entries for your package:
Announcing to debian-devel-changes at lists.debian.org
Closing bugs: 677648
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