[Debian-med-packaging] Bug#733329: ITP: r-bioc-genomicfeatures -- GNU R tools for making and manipulating transcript centric annotations
Andreas Tille
tille at debian.org
Sat Dec 28 16:03:19 UTC 2013
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : r-bioc-genomicfeatures
Version : 1.14.2-1
Upstream Author : M. Carlson, H. Pages, e.a.
* URL : http://www.bioconductor.org/packages/release/bioc/html/GenomicFeatures.html
* License : Artistic-2.0
Programming Lang: R
Description : GNU R tools for making and manipulating transcript centric annotations
A set of tools and methods for making and manipulating transcript
centric annotations. With these tools the user can easily download the
genomic locations of the transcripts, exons and cds of a given organism,
from either the UCSC Genome Browser or a BioMart database (more sources
will be supported in the future). This information is then stored in a
local database that keeps track of the relationship between transcripts,
exons, cds and genes. Flexible methods are provided for extracting the
desired features in a convenient format.
This is another precondition to update r-bioc-cummerbund maintained by
Debian Med team. It is in SVN at
svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicfeatures/trunk/
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