[Debian-med-packaging] Bug#697158: no issue with libsnappy and picard-tools

[olivier sallou]

Hi,
I just tried to build again picard-tools in a clean chroot with pbuilder
and picard-tools successfully build with no modifications in libsnappy.

I think your problem is with the picard-tools package not getting the jar
file. You should check the path you use to find libsnappy jar file.


make[1]: Entering directory `/tmp/buildd/picard-tools-1.82'
dh_auto_build -- -Dant.build.javac.source=1.5 -Dant.build.javac.target=1.5
Buildfile: /tmp/buildd/picard-tools-1.82/build.xml
     [exec] Execute failed: java.io.IOException: Cannot run program
"svnversion": java.io.IOException: error=2, No such file or directory

init:

compile-sam-jdk:
    [mkdir] Created dir: /tmp/buildd/picard-tools-1.82/classes
    [javac] /tmp/buildd/picard-tools-1.82/build.xml:101: warning:
'includeantruntime' was not set, defaulting to build.sysclasspath=last; set
to false for repeatable builds
    [javac] Compiling 112 source files to
/tmp/buildd/picard-tools-1.82/classes
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -Xlint:deprecation for details.
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.

sam-jar:
    [mkdir] Created dir: /tmp/buildd/picard-tools-1.82/dist
      [jar] Building jar: /tmp/buildd/picard-tools-1.82/dist/sam-1.82.jar

compile-picard:
    [javac] /tmp/buildd/picard-tools-1.82/build.xml:113: warning:
'includeantruntime' was not set, defaulting to build.sysclasspath=last; set
to false for repeatable builds
    [javac] Compiling 218 source files to
/tmp/buildd/picard-tools-1.82/classes
    [javac] Note: Some input files use or override a deprecated API.
    [javac] Note: Recompile with -Xlint:deprecation for details.
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.

compile-src:


Olivier

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