[Debian-med-packaging] R (+Rniftilib) (fwd)

[Andreas Tille]

Hi Karl,

I admit I'm not sure about what package you are talking about.  We have

$ LANG=C apt-cache search niftilib
libnifti-dev - IO libraries for the NIfTI-1 data format
libnifti-doc - NIfTI library API documentation
libnifti2 - IO libraries for the NIfTI-1 data format
nifti-bin - tools shipped with the NIfTI library

which do not look like these would contain a GNU R interface.  Please
be so kind and use the reportbug tool to report the problem which
provides more useful information for us to track down the issue.

Kind regards

        Andreas.

On Fri, Jul 19, 2013 at 05:15:39PM -0700, KARL A. WOELFER wrote:
> 
> 
> 
> ---------- Forwarded message ----------
> Date: Fri, 19 Jul 2013 17:14:46 -0700 (PDT)
> From: KARL A. WOELFER <kwoelfer at u.washington.edu>
> To: lawrencc at debian.org
> Subject: R (+Rniftilib)
> 
> Rniftilib works beautifully with R 3.0.0. Several weeks later I did
> an apt-get install of r-base-dev,
> current version is 3.0.1, and it broke Rniftilib.
> 
> 
> -----------------------------------------------------------------------------------------------------
> p4u1 at executive:~/Subject_Data/SLS/MIDLIFE_AGING/wave3$ R
> 
> R version 3.0.1 (2013-05-16) -- "Good Sport"
> Copyright (C) 2013 The R Foundation for Statistical Computing
> Platform: x86_64-pc-linux-gnu (64-bit)
> 
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
> 
>   Natural language support but running in an English locale
> 
> R is a collaborative project with many contributors.
> Type 'contributors()' for more information and
> 'citation()' on how to cite R or R packages in publications.
> 
> Type 'demo()' for some demos, 'help()' for on-line help, or
> 'help.start()' for an HTML browser interface to help.
> Type 'q()' to quit R.
> 
> >library(Rniftilib)
> Error in dyn.load(file, DLLpath = DLLpath, ...) :
>   unable to load shared object
> '/install_scripts/R_Libs/Rniftilib/libs/Rniftilib.so':
>   /lib/libc.so.6: version `GLIBC_2.14' not found (required by
> /install_scripts/R_Libs/Rniftilib/libs/Rniftilib.so)
> Error: package or namespace load failed for ‘Rniftilib’
> 
> -----------------------------------------------------------------------------------------------------------
> 
> 
> Maybe we need version 3.0.0 ? Sorry for the trouble.
> Thank you for your time and expertise.
> 
> - Karl WOELFER
> IBIC University of Washington

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