[Debian-med-packaging] Bug#730921: hmmer2: FTBFS: Can't locate getopts.pl in @INC

[David Suárez]

Source: hmmer2
Version: 2.3.2-6
Severity: serious
Tags: jessie sid
User: debian-qa at lists.debian.org
Usertags: qa-ftbfs-20131128 qa-ftbfs
Justification: FTBFS on amd64

Hi,

During a rebuild of all packages in sid, your package failed to build on
amd64.

Relevant part (hopefully):
> make[2]: Entering directory `/«PKGBUILDDIR»/testsuite'
> 
> Running test suite exercises.
> Warning: some tests may take several minutes to complete.
> 
> ./sqc 2 exercises.sqc . ../src
> Can't locate getopts.pl in @INC (@INC contains: /etc/perl /usr/local/lib/perl/5.18.1 /usr/local/share/perl/5.18.1 /usr/lib/perl5 /usr/share/perl5 /usr/lib/perl/5.18 /usr/share/perl/5.18 /usr/local/lib/site_perl .) at ./sqc line 179.
> make[2]: *** [check] Error 2
> make[2]: Leaving directory `/«PKGBUILDDIR»/testsuite'
> make[1]: *** [check] Error 2
> dh_auto_test: make -j1 check returned exit code 2

The full build log is available from:
   http://aws-logs.debian.net/ftbfs-logs/2013/11/28/hmmer2_2.3.2-6_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.