[Debian-med-packaging] Bug#737314: ITP: seqtk -- sampling, trimming, fastq2fasta, subsequence, reverse complement

[Andreas Tille]

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : seqtk
  Version         : 1.0
  Upstream Author : Heng Li <lh3 at me.com>
* URL             : https://github.com/lh3/seqtk
* License         : MIT
  Programming Lang: C
  Description     : sampling, trimming, fastq2fasta, subsequence, reverse complement
 Currently, seqtk supports quality based trimming with the phred
 algorithm, converting fastq to fasta, reverse complementing sequences,
 extracting or masking subsequences in regions given in a BED/name list
 file, and more.  It contains a subsampling module to sample exactly n
 sequences or a fraction of sequences.
 .
 Seqtk supports both fasta and fastq input files, which can be
 optionally gzip compressed.

This package is maintained by the Debian Med team and was created at the
Debian Med Sprint at request of Brad Chapman.