[Debian-med-packaging] Bug#738530: ITP: ipig -- integrating PSMs into genome browser visualisations
Andreas Tille
tille at debian.org
Mon Feb 10 09:26:14 UTC 2014
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>
* Package name : ipig
Version : SVN r5
Upstream Author : Mathias Kuhring <KuhringM at rki.de>
* URL : http://sourceforge.net/projects/ipig/
* License : BSD
Programming Lang: Java
Description : integrating PSMs into genome browser visualisations
iPiG targets the integration of peptide spectrum matches (PSMs) from
mass spectrometry (MS) peptide identifications into genomic
visualisations provided by genome browser such as the UCSC genome
browser (http://genome.ucsc.edu/).
.
iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in
text format and provides results in genome track formats (BED and GFF3
files), which can be easily imported into genome browsers.
Remark: This package is maintained by the Debian Med team and the
packaging is available at
git://anonscm.debian.org/debian-med/ipig.git
It belongs to a set of packages listed at http://www.renard.it/.
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