[Debian-med-packaging] Bug#738551: ITP: giira -- RNA-Seq driven gene finding incorporating ambiguous reads

[Andreas Tille]

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille at debian.org>

* Package name    : giira
  Version         : 0.0.20140210
  Upstream Author : Franziska Zickmann <ZickmannF at rki.de>
* URL             : http://sourceforge.net/projects/giira/
* License         : GPLv3
  Programming Lang: Java, Python
  Description     : RNA-Seq driven gene finding incorporating ambiguous reads
 GIIRA is a gene prediction method that identifies potential coding
 regions exclusively based on the mapping of reads from an RNA-Seq
 experiment.  It was foremost designed for prokaryotic gene prediction
 and is able to resolve genes within the expressed region of an operon.
 However, it is also applicable to eukaryotes and predicts exon intron
 structures as well as alternative isoforms.

Remark: This package is maintained by the Debian Med team and the
packaging is available at 
  git://anonscm.debian.org/debian-med/giira.git
It belongs to a set of packages listed at http://www.renard.it/.