[Debian-med-packaging] Bug#727695: Reopening, not fixed yet [was: Bug#727695 closed by Andreas Tille <tille at debian.org> (Bug#727695: fixed in r-bioc-edger 3.4.2+dfsg-1)]

[Martin Pitt]

found 727695 3.4.2+dfsg-1
tag 727695 patch
user ubuntu-devel at lists.ubuntu.com
usertags 727695 origin-ubuntu ubuntu-patch trusty
thanks

Hello Andreas,

Debian Bug Tracking System [2014-01-05  0:06 +0000]:
> #727695: autopkgtest fails: copy&paste error, and there is no package called ‘MASS’

The "MASS" part is fixed, but the "limma" copy&paste error in
debian/tests/upstream is still there. Also, in that latest version you
added

  Depends: r-cran-mass

which is missing the actual primary package (if you don't specify
Depends it defaults to "Depends: @" which means "all binaries from
that source").

Attached debdiff fixes both problems, and the test succeeds now:

  https://jenkins.qa.ubuntu.com/job/trusty-adt-r-bioc-edger/17/ARCH=i386,label=adt/

Thanks for considering,

Martin
-- 
Martin Pitt                        | http://www.piware.de
Ubuntu Developer (www.ubuntu.com)  | Debian Developer  (www.debian.org)
-------------- next part --------------
diff -Nru r-bioc-edger-3.4.2+dfsg/debian/changelog r-bioc-edger-3.4.2+dfsg/debian/changelog
--- r-bioc-edger-3.4.2+dfsg/debian/changelog	2014-01-05 00:36:02.000000000 +0100
+++ r-bioc-edger-3.4.2+dfsg/debian/changelog	2014-01-08 08:03:48.000000000 +0100
@@ -1,3 +1,12 @@
+r-bioc-edger (3.4.2+dfsg-1ubuntu1) trusty; urgency=medium
+
+  * debian/tests/control: Re-add @ test dependency which got dropped in the
+    previous upload.
+  * debian/tests/upstream: Run edger tests, not limma (copy&paste error).
+    (Closes: #727695)
+
+ -- Martin Pitt <martin.pitt at ubuntu.com>  Wed, 08 Jan 2014 08:03:41 +0100
+
 r-bioc-edger (3.4.2+dfsg-1) unstable; urgency=low
 
   [ Charles Plessy ]
diff -Nru r-bioc-edger-3.4.2+dfsg/debian/tests/control r-bioc-edger-3.4.2+dfsg/debian/tests/control
--- r-bioc-edger-3.4.2+dfsg/debian/tests/control	2014-01-05 00:36:02.000000000 +0100
+++ r-bioc-edger-3.4.2+dfsg/debian/tests/control	2014-01-08 08:03:39.000000000 +0100
@@ -1,2 +1,2 @@
 Tests: upstream
-Depends: r-cran-mass
+Depends: @, r-cran-mass
diff -Nru r-bioc-edger-3.4.2+dfsg/debian/tests/upstream r-bioc-edger-3.4.2+dfsg/debian/tests/upstream
--- r-bioc-edger-3.4.2+dfsg/debian/tests/upstream	2014-01-05 00:36:02.000000000 +0100
+++ r-bioc-edger-3.4.2+dfsg/debian/tests/upstream	2014-01-08 08:03:39.000000000 +0100
@@ -4,7 +4,7 @@
 
 cd $TEMPORARY_DIR
 
-cp /usr/share/doc/r-bioc-limma/tests/* .
+cp /usr/share/doc/r-bioc-edger/tests/* .
 for test in *R.gz
 do
   zcat ${test} > `basename ${test} .gz`
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